Gene : TLP8 A. thaliana TAIR10
Primary Identifier:  ? AT1G16070 Defline:  (1 of 1) PTHR16517//PTHR16517:SF27 - TUBBY-RELATED // TUBBY-LIKE PROTEIN 8
Genomic Order:  1618 Name:  ? AT1G16070
Secondary Identifier:  ? PAC:19655158
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16070 0.5kb upstream 0.5kb upstream 2524 true Chr1: 5511873-5514396 Arabidopsis thaliana
AT1G16070 0.5kb upstream 0.5kb upstream 500 false Chr1: 5513897-5514396 Arabidopsis thaliana
AT1G16070 0.5kb downstream 0.5kb downstream 2524 true Chr1: 5511373-5513896 Arabidopsis thaliana
AT1G16070 0.5kb downstream 0.5kb downstream 500 false Chr1: 5511373-5511872 Arabidopsis thaliana
AT1G16070 1.0kb upstream 1.0kb upstream 3024 true Chr1: 5511873-5514896 Arabidopsis thaliana
AT1G16070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5513897-5514896 Arabidopsis thaliana
AT1G16070 1.0kb downstream 1.0kb downstream 3024 true Chr1: 5510873-5513896 Arabidopsis thaliana
AT1G16070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5510873-5511872 Arabidopsis thaliana
AT1G16070 2.0kb upstream 2.0kb upstream 4024 true Chr1: 5511873-5515896 Arabidopsis thaliana
AT1G16070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5513897-5515896 Arabidopsis thaliana
AT1G16070 2.0kb downstream 2.0kb downstream 4024 true Chr1: 5509873-5513896 Arabidopsis thaliana
AT1G16070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5509873-5511872 Arabidopsis thaliana
AT1G16070 5.0kb upstream 5.0kb upstream 7024 true Chr1: 5511873-5518896 Arabidopsis thaliana
AT1G16070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5513897-5518896 Arabidopsis thaliana
AT1G16070 5.0kb downstream 5.0kb downstream 7024 true Chr1: 5506873-5513896 Arabidopsis thaliana
AT1G16070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5506873-5511872 Arabidopsis thaliana
AT1G16070 10.0kb upstream 10.0kb upstream 12024 true Chr1: 5511873-5523896 Arabidopsis thaliana
AT1G16070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5513897-5523896 Arabidopsis thaliana
AT1G16070 10.0kb downstream 10.0kb downstream 12024 true Chr1: 5501873-5513896 Arabidopsis thaliana
AT1G16070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5501873-5511872 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373306 5261 Brassicaceae View MSA
123834445 5264 Brassicales-Malvales View MSA
124348028 5266 SBM View MSA
124243102 5268 Malvidae View MSA
124063219 5270 Rosid View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411        
cufflinks 2.849        
cufflinks 0.239     Low Low
cufflinks 2.171        
cufflinks 0.333        
cufflinks 4.501       High

0 Strain