Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G15770 0.5kb upstream | 0.5kb | upstream | 1889 | true | Chr1: 5426892-5428780 | Arabidopsis thaliana |
AT1G15770 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 5428281-5428780 | Arabidopsis thaliana |
AT1G15770 0.5kb downstream | 0.5kb | downstream | 1889 | true | Chr1: 5426392-5428280 | Arabidopsis thaliana |
AT1G15770 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 5426392-5426891 | Arabidopsis thaliana |
AT1G15770 1.0kb upstream | 1.0kb | upstream | 2389 | true | Chr1: 5426892-5429280 | Arabidopsis thaliana |
AT1G15770 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 5428281-5429280 | Arabidopsis thaliana |
AT1G15770 1.0kb downstream | 1.0kb | downstream | 2389 | true | Chr1: 5425892-5428280 | Arabidopsis thaliana |
AT1G15770 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 5425892-5426891 | Arabidopsis thaliana |
AT1G15770 2.0kb upstream | 2.0kb | upstream | 3389 | true | Chr1: 5426892-5430280 | Arabidopsis thaliana |
AT1G15770 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 5428281-5430280 | Arabidopsis thaliana |
AT1G15770 2.0kb downstream | 2.0kb | downstream | 3389 | true | Chr1: 5424892-5428280 | Arabidopsis thaliana |
AT1G15770 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 5424892-5426891 | Arabidopsis thaliana |
AT1G15770 5.0kb upstream | 5.0kb | upstream | 6389 | true | Chr1: 5426892-5433280 | Arabidopsis thaliana |
AT1G15770 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 5428281-5433280 | Arabidopsis thaliana |
AT1G15770 5.0kb downstream | 5.0kb | downstream | 6389 | true | Chr1: 5421892-5428280 | Arabidopsis thaliana |
AT1G15770 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 5421892-5426891 | Arabidopsis thaliana |
AT1G15770 10.0kb upstream | 10.0kb | upstream | 11389 | true | Chr1: 5426892-5438280 | Arabidopsis thaliana |
AT1G15770 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 5428281-5438280 | Arabidopsis thaliana |
AT1G15770 10.0kb downstream | 10.0kb | downstream | 11389 | true | Chr1: 5416892-5428280 | Arabidopsis thaliana |
AT1G15770 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 5416892-5426891 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122329032 | 5261 | Brassicaceae | Singleton cluster - no MSA |
123770351 | 5264 | Brassicales-Malvales | Singleton cluster - no MSA |
124268893 | 5266 | SBM | Singleton cluster - no MSA |
124125063 | 5268 | Malvidae | Singleton cluster - no MSA |
124073340 | 5270 | Rosid | View MSA |
123756989 | 5271 | Pentapetalae | View MSA |
122797451 | 5272 | Eudicot | View MSA |
122048270 | 5273 | Angiosperm | View MSA |
121350628 | 5274 | Embryophyte | View MSA |
123381823 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.306 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.214 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.159 | Low |