Gene : TPL A. thaliana TAIR10
Primary Identifier:  ? AT1G15750 Defline:  (1 of 2) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED
Genomic Order:  1581 Name:  ? AT1G15750
Secondary Identifier:  ? PAC:19649384
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15750 0.5kb upstream 0.5kb upstream 6717 true Chr1: 5414817-5421533 Arabidopsis thaliana
AT1G15750 0.5kb upstream 0.5kb upstream 500 false Chr1: 5421034-5421533 Arabidopsis thaliana
AT1G15750 0.5kb downstream 0.5kb downstream 6717 true Chr1: 5414317-5421033 Arabidopsis thaliana
AT1G15750 0.5kb downstream 0.5kb downstream 500 false Chr1: 5414317-5414816 Arabidopsis thaliana
AT1G15750 1.0kb upstream 1.0kb upstream 7217 true Chr1: 5414817-5422033 Arabidopsis thaliana
AT1G15750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5421034-5422033 Arabidopsis thaliana
AT1G15750 1.0kb downstream 1.0kb downstream 7217 true Chr1: 5413817-5421033 Arabidopsis thaliana
AT1G15750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5413817-5414816 Arabidopsis thaliana
AT1G15750 2.0kb upstream 2.0kb upstream 8217 true Chr1: 5414817-5423033 Arabidopsis thaliana
AT1G15750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5421034-5423033 Arabidopsis thaliana
AT1G15750 2.0kb downstream 2.0kb downstream 8217 true Chr1: 5412817-5421033 Arabidopsis thaliana
AT1G15750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5412817-5414816 Arabidopsis thaliana
AT1G15750 5.0kb upstream 5.0kb upstream 11217 true Chr1: 5414817-5426033 Arabidopsis thaliana
AT1G15750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5421034-5426033 Arabidopsis thaliana
AT1G15750 5.0kb downstream 5.0kb downstream 11217 true Chr1: 5409817-5421033 Arabidopsis thaliana
AT1G15750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5409817-5414816 Arabidopsis thaliana
AT1G15750 10.0kb upstream 10.0kb upstream 16217 true Chr1: 5414817-5431033 Arabidopsis thaliana
AT1G15750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5421034-5431033 Arabidopsis thaliana
AT1G15750 10.0kb downstream 10.0kb downstream 16217 true Chr1: 5404817-5421033 Arabidopsis thaliana
AT1G15750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5404817-5414816 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380809 5261 Brassicaceae View MSA
123831022 5264 Brassicales-Malvales View MSA
124338256 5266 SBM View MSA
124249364 5268 Malvidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.106        
cufflinks 12.551        
cufflinks 5.672       Low
cufflinks 12.166        
cufflinks 5.845       Low
cufflinks 12.165        

0 Strain