Gene : AT1G15910 A. thaliana TAIR10
Defline:  (1 of 6) PTHR21596//PTHR21596:SF3 - RIBONUCLEASE P SUBUNIT P38 // F16A14.2-RELATED Genomic Order:  1601
Name:  ? AT1G15910 Secondary Identifier:  ? PAC:19655234
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15910 0.5kb upstream 0.5kb upstream 4290 true Chr1: 5464836-5469125 Arabidopsis thaliana
AT1G15910 0.5kb upstream 0.5kb upstream 500 false Chr1: 5464836-5465335 Arabidopsis thaliana
AT1G15910 0.5kb downstream 0.5kb downstream 4290 true Chr1: 5465336-5469625 Arabidopsis thaliana
AT1G15910 0.5kb downstream 0.5kb downstream 500 false Chr1: 5469126-5469625 Arabidopsis thaliana
AT1G15910 1.0kb upstream 1.0kb upstream 4790 true Chr1: 5464336-5469125 Arabidopsis thaliana
AT1G15910 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5464336-5465335 Arabidopsis thaliana
AT1G15910 1.0kb downstream 1.0kb downstream 4790 true Chr1: 5465336-5470125 Arabidopsis thaliana
AT1G15910 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5469126-5470125 Arabidopsis thaliana
AT1G15910 2.0kb upstream 2.0kb upstream 5790 true Chr1: 5463336-5469125 Arabidopsis thaliana
AT1G15910 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5463336-5465335 Arabidopsis thaliana
AT1G15910 2.0kb downstream 2.0kb downstream 5790 true Chr1: 5465336-5471125 Arabidopsis thaliana
AT1G15910 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5469126-5471125 Arabidopsis thaliana
AT1G15910 5.0kb upstream 5.0kb upstream 8790 true Chr1: 5460336-5469125 Arabidopsis thaliana
AT1G15910 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5460336-5465335 Arabidopsis thaliana
AT1G15910 5.0kb downstream 5.0kb downstream 8790 true Chr1: 5465336-5474125 Arabidopsis thaliana
AT1G15910 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5469126-5474125 Arabidopsis thaliana
AT1G15910 10.0kb upstream 10.0kb upstream 13790 true Chr1: 5455336-5469125 Arabidopsis thaliana
AT1G15910 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5455336-5465335 Arabidopsis thaliana
AT1G15910 10.0kb downstream 10.0kb downstream 13790 true Chr1: 5465336-5479125 Arabidopsis thaliana
AT1G15910 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5469126-5479125 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368722 5261 Brassicaceae View MSA
123834266 5264 Brassicales-Malvales View MSA
124338715 5266 SBM View MSA
124238102 5268 Malvidae View MSA
124066468 5270 Rosid View MSA
123741762 5271 Pentapetalae View MSA
122795900 5272 Eudicot View MSA
122047890 5273 Angiosperm View MSA
121350157 5274 Embryophyte View MSA
123381596 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.12        
cufflinks 14.98       High
cufflinks 6.562       Low
cufflinks 14.782        
cufflinks 6.16       Low
cufflinks 12.975        

0 Strain