Gene : PWP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G15440 Defline:  (1 of 1) PTHR19858 - WD40 REPEAT PROTEIN
Genomic Order:  1553 Name:  ? AT1G15440
Secondary Identifier:  ? PAC:19651748
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15440 0.5kb upstream 0.5kb upstream 3954 true Chr1: 5306061-5310014 Arabidopsis thaliana
AT1G15440 0.5kb upstream 0.5kb upstream 500 false Chr1: 5309515-5310014 Arabidopsis thaliana
AT1G15440 0.5kb downstream 0.5kb downstream 3954 true Chr1: 5305561-5309514 Arabidopsis thaliana
AT1G15440 0.5kb downstream 0.5kb downstream 500 false Chr1: 5305561-5306060 Arabidopsis thaliana
AT1G15440 1.0kb upstream 1.0kb upstream 4454 true Chr1: 5306061-5310514 Arabidopsis thaliana
AT1G15440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5309515-5310514 Arabidopsis thaliana
AT1G15440 1.0kb downstream 1.0kb downstream 4454 true Chr1: 5305061-5309514 Arabidopsis thaliana
AT1G15440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5305061-5306060 Arabidopsis thaliana
AT1G15440 2.0kb upstream 2.0kb upstream 5454 true Chr1: 5306061-5311514 Arabidopsis thaliana
AT1G15440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5309515-5311514 Arabidopsis thaliana
AT1G15440 2.0kb downstream 2.0kb downstream 5454 true Chr1: 5304061-5309514 Arabidopsis thaliana
AT1G15440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5304061-5306060 Arabidopsis thaliana
AT1G15440 5.0kb upstream 5.0kb upstream 8454 true Chr1: 5306061-5314514 Arabidopsis thaliana
AT1G15440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5309515-5314514 Arabidopsis thaliana
AT1G15440 5.0kb downstream 5.0kb downstream 8454 true Chr1: 5301061-5309514 Arabidopsis thaliana
AT1G15440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5301061-5306060 Arabidopsis thaliana
AT1G15440 10.0kb upstream 10.0kb upstream 13454 true Chr1: 5306061-5319514 Arabidopsis thaliana
AT1G15440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5309515-5319514 Arabidopsis thaliana
AT1G15440 10.0kb downstream 10.0kb downstream 13454 true Chr1: 5296061-5309514 Arabidopsis thaliana
AT1G15440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5296061-5306060 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362142 5261 Brassicaceae View MSA
123832361 5264 Brassicales-Malvales View MSA
124340664 5266 SBM View MSA
124251867 5268 Malvidae View MSA
124068186 5270 Rosid View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.66        
cufflinks 6.748        
cufflinks 3.178        
cufflinks 7.139        
cufflinks 2.871       Low
cufflinks 6.978        

0 Strain