Gene : AT1G15385 A. thaliana TAIR10
Defline:  (1 of 28) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1546
Name:  ? AT1G15385 Secondary Identifier:  ? PAC:19653997
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15385 0.5kb upstream 0.5kb upstream 1010 true Chr1: 5292756-5293765 Arabidopsis thaliana
AT1G15385 0.5kb upstream 0.5kb upstream 500 false Chr1: 5293266-5293765 Arabidopsis thaliana
AT1G15385 0.5kb downstream 0.5kb downstream 1010 true Chr1: 5292256-5293265 Arabidopsis thaliana
AT1G15385 0.5kb downstream 0.5kb downstream 500 false Chr1: 5292256-5292755 Arabidopsis thaliana
AT1G15385 1.0kb upstream 1.0kb upstream 1510 true Chr1: 5292756-5294265 Arabidopsis thaliana
AT1G15385 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5293266-5294265 Arabidopsis thaliana
AT1G15385 1.0kb downstream 1.0kb downstream 1510 true Chr1: 5291756-5293265 Arabidopsis thaliana
AT1G15385 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5291756-5292755 Arabidopsis thaliana
AT1G15385 2.0kb upstream 2.0kb upstream 2510 true Chr1: 5292756-5295265 Arabidopsis thaliana
AT1G15385 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5293266-5295265 Arabidopsis thaliana
AT1G15385 2.0kb downstream 2.0kb downstream 2510 true Chr1: 5290756-5293265 Arabidopsis thaliana
AT1G15385 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5290756-5292755 Arabidopsis thaliana
AT1G15385 5.0kb upstream 5.0kb upstream 5510 true Chr1: 5292756-5298265 Arabidopsis thaliana
AT1G15385 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5293266-5298265 Arabidopsis thaliana
AT1G15385 5.0kb downstream 5.0kb downstream 5510 true Chr1: 5287756-5293265 Arabidopsis thaliana
AT1G15385 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5287756-5292755 Arabidopsis thaliana
AT1G15385 10.0kb upstream 10.0kb upstream 10510 true Chr1: 5292756-5303265 Arabidopsis thaliana
AT1G15385 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5293266-5303265 Arabidopsis thaliana
AT1G15385 10.0kb downstream 10.0kb downstream 10510 true Chr1: 5282756-5293265 Arabidopsis thaliana
AT1G15385 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5282756-5292755 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369122 5261 Brassicaceae View MSA
123840805 5264 Brassicales-Malvales View MSA
124348914 5266 SBM View MSA
124244692 5268 Malvidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low Low
cufflinks 1.397        
cufflinks 0.276        
cufflinks 3.348       High
cufflinks 0.536        
cufflinks 1.017        

0 Strain