Gene : AT1G15415 A. thaliana TAIR10
Defline:  (1 of 2) PTHR34191:SF3 - F6D8.10-RELATED Genomic Order:  1550
Name:  ? AT1G15415 Secondary Identifier:  ? PAC:19653470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15415 0.5kb upstream 0.5kb upstream 1171 true Chr1: 5300742-5301912 Arabidopsis thaliana
AT1G15415 0.5kb upstream 0.5kb upstream 500 false Chr1: 5301413-5301912 Arabidopsis thaliana
AT1G15415 0.5kb downstream 0.5kb downstream 1171 true Chr1: 5300242-5301412 Arabidopsis thaliana
AT1G15415 0.5kb downstream 0.5kb downstream 500 false Chr1: 5300242-5300741 Arabidopsis thaliana
AT1G15415 1.0kb upstream 1.0kb upstream 1671 true Chr1: 5300742-5302412 Arabidopsis thaliana
AT1G15415 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5301413-5302412 Arabidopsis thaliana
AT1G15415 1.0kb downstream 1.0kb downstream 1671 true Chr1: 5299742-5301412 Arabidopsis thaliana
AT1G15415 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5299742-5300741 Arabidopsis thaliana
AT1G15415 2.0kb upstream 2.0kb upstream 2671 true Chr1: 5300742-5303412 Arabidopsis thaliana
AT1G15415 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5301413-5303412 Arabidopsis thaliana
AT1G15415 2.0kb downstream 2.0kb downstream 2671 true Chr1: 5298742-5301412 Arabidopsis thaliana
AT1G15415 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5298742-5300741 Arabidopsis thaliana
AT1G15415 5.0kb upstream 5.0kb upstream 5671 true Chr1: 5300742-5306412 Arabidopsis thaliana
AT1G15415 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5301413-5306412 Arabidopsis thaliana
AT1G15415 5.0kb downstream 5.0kb downstream 5671 true Chr1: 5295742-5301412 Arabidopsis thaliana
AT1G15415 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5295742-5300741 Arabidopsis thaliana
AT1G15415 10.0kb upstream 10.0kb upstream 10671 true Chr1: 5300742-5311412 Arabidopsis thaliana
AT1G15415 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5301413-5311412 Arabidopsis thaliana
AT1G15415 10.0kb downstream 10.0kb downstream 10671 true Chr1: 5290742-5301412 Arabidopsis thaliana
AT1G15415 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5290742-5300741 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371531 5261 Brassicaceae View MSA
123837740 5264 Brassicales-Malvales View MSA
124322348 5266 SBM View MSA
124248303 5268 Malvidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.53       Low
cufflinks 3.229       High
cufflinks 0.922        
cufflinks 2.094        
cufflinks 1.349        
cufflinks 1.946        

0 Strain