Gene : AT1G15240 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22999:SF19 - PHOX (PX) DOMAIN-CONTAINING PROTEIN Genomic Order:  1532
Name:  ? AT1G15240 Secondary Identifier:  ? PAC:19650979
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15240 0.5kb upstream 0.5kb upstream 5655 true Chr1: 5242950-5248604 Arabidopsis thaliana
AT1G15240 0.5kb upstream 0.5kb upstream 500 false Chr1: 5242950-5243449 Arabidopsis thaliana
AT1G15240 0.5kb downstream 0.5kb downstream 5655 true Chr1: 5243450-5249104 Arabidopsis thaliana
AT1G15240 0.5kb downstream 0.5kb downstream 500 false Chr1: 5248605-5249104 Arabidopsis thaliana
AT1G15240 1.0kb upstream 1.0kb upstream 6155 true Chr1: 5242450-5248604 Arabidopsis thaliana
AT1G15240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5242450-5243449 Arabidopsis thaliana
AT1G15240 1.0kb downstream 1.0kb downstream 6155 true Chr1: 5243450-5249604 Arabidopsis thaliana
AT1G15240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5248605-5249604 Arabidopsis thaliana
AT1G15240 2.0kb upstream 2.0kb upstream 7155 true Chr1: 5241450-5248604 Arabidopsis thaliana
AT1G15240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5241450-5243449 Arabidopsis thaliana
AT1G15240 2.0kb downstream 2.0kb downstream 7155 true Chr1: 5243450-5250604 Arabidopsis thaliana
AT1G15240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5248605-5250604 Arabidopsis thaliana
AT1G15240 5.0kb upstream 5.0kb upstream 10155 true Chr1: 5238450-5248604 Arabidopsis thaliana
AT1G15240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5238450-5243449 Arabidopsis thaliana
AT1G15240 5.0kb downstream 5.0kb downstream 10155 true Chr1: 5243450-5253604 Arabidopsis thaliana
AT1G15240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5248605-5253604 Arabidopsis thaliana
AT1G15240 10.0kb upstream 10.0kb upstream 15155 true Chr1: 5233450-5248604 Arabidopsis thaliana
AT1G15240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5233450-5243449 Arabidopsis thaliana
AT1G15240 10.0kb downstream 10.0kb downstream 15155 true Chr1: 5243450-5258604 Arabidopsis thaliana
AT1G15240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5248605-5258604 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366731 5261 Brassicaceae View MSA
123835210 5264 Brassicales-Malvales View MSA
124343709 5266 SBM View MSA
124237849 5268 Malvidae View MSA
124061422 5270 Rosid View MSA
123739237 5271 Pentapetalae View MSA
122786426 5272 Eudicot View MSA
122041700 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.477       Low
cufflinks 5.904        
cufflinks 5.001        
cufflinks 6.388       High
cufflinks 5.334        
cufflinks 5.122        

0 Strain