Gene : AT1G15190 A. thaliana TAIR10
Defline:  Fasciclin-like arabinogalactan family protein Genomic Order:  1526
Name:  ? AT1G15190 Secondary Identifier:  ? PAC:19657346
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15190 0.5kb upstream 0.5kb upstream 1650 true Chr1: 5226553-5228202 Arabidopsis thaliana
AT1G15190 0.5kb upstream 0.5kb upstream 500 false Chr1: 5226553-5227052 Arabidopsis thaliana
AT1G15190 0.5kb downstream 0.5kb downstream 1650 true Chr1: 5227053-5228702 Arabidopsis thaliana
AT1G15190 0.5kb downstream 0.5kb downstream 500 false Chr1: 5228203-5228702 Arabidopsis thaliana
AT1G15190 1.0kb upstream 1.0kb upstream 2150 true Chr1: 5226053-5228202 Arabidopsis thaliana
AT1G15190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5226053-5227052 Arabidopsis thaliana
AT1G15190 1.0kb downstream 1.0kb downstream 2150 true Chr1: 5227053-5229202 Arabidopsis thaliana
AT1G15190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5228203-5229202 Arabidopsis thaliana
AT1G15190 2.0kb upstream 2.0kb upstream 3150 true Chr1: 5225053-5228202 Arabidopsis thaliana
AT1G15190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5225053-5227052 Arabidopsis thaliana
AT1G15190 2.0kb downstream 2.0kb downstream 3150 true Chr1: 5227053-5230202 Arabidopsis thaliana
AT1G15190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5228203-5230202 Arabidopsis thaliana
AT1G15190 5.0kb upstream 5.0kb upstream 6150 true Chr1: 5222053-5228202 Arabidopsis thaliana
AT1G15190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5222053-5227052 Arabidopsis thaliana
AT1G15190 5.0kb downstream 5.0kb downstream 6150 true Chr1: 5227053-5233202 Arabidopsis thaliana
AT1G15190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5228203-5233202 Arabidopsis thaliana
AT1G15190 10.0kb upstream 10.0kb upstream 11150 true Chr1: 5217053-5228202 Arabidopsis thaliana
AT1G15190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5217053-5227052 Arabidopsis thaliana
AT1G15190 10.0kb downstream 10.0kb downstream 11150 true Chr1: 5227053-5238202 Arabidopsis thaliana
AT1G15190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5228203-5238202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367259 5261 Brassicaceae View MSA
123836003 5264 Brassicales-Malvales View MSA
124322122 5266 SBM View MSA
124247783 5268 Malvidae View MSA
124038918 5270 Rosid View MSA
123753187 5271 Pentapetalae View MSA
122794600 5272 Eudicot View MSA
122049688 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.076     Low Low
cufflinks 0.909       High
cufflinks 0.157     Low  
cufflinks 0.446        
cufflinks 0.071     Low Low
cufflinks 1.067       High

0 Strain