Gene : LPP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G15080 Defline:  (1 of 3) PTHR10165//PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE // LIPID PHOSPHATE PHOSPHATASE 1-RELATED
Genomic Order:  1514 Name:  ? AT1G15080
Secondary Identifier:  ? PAC:19653514
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRIGLSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15080 0.5kb upstream 0.5kb upstream 2548 true Chr1: 5187126-5189673 Arabidopsis thaliana
AT1G15080 0.5kb upstream 0.5kb upstream 500 false Chr1: 5187126-5187625 Arabidopsis thaliana
AT1G15080 0.5kb downstream 0.5kb downstream 2548 true Chr1: 5187626-5190173 Arabidopsis thaliana
AT1G15080 0.5kb downstream 0.5kb downstream 500 false Chr1: 5189674-5190173 Arabidopsis thaliana
AT1G15080 1.0kb upstream 1.0kb upstream 3048 true Chr1: 5186626-5189673 Arabidopsis thaliana
AT1G15080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5186626-5187625 Arabidopsis thaliana
AT1G15080 1.0kb downstream 1.0kb downstream 3048 true Chr1: 5187626-5190673 Arabidopsis thaliana
AT1G15080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5189674-5190673 Arabidopsis thaliana
AT1G15080 2.0kb upstream 2.0kb upstream 4048 true Chr1: 5185626-5189673 Arabidopsis thaliana
AT1G15080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5185626-5187625 Arabidopsis thaliana
AT1G15080 2.0kb downstream 2.0kb downstream 4048 true Chr1: 5187626-5191673 Arabidopsis thaliana
AT1G15080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5189674-5191673 Arabidopsis thaliana
AT1G15080 5.0kb upstream 5.0kb upstream 7048 true Chr1: 5182626-5189673 Arabidopsis thaliana
AT1G15080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5182626-5187625 Arabidopsis thaliana
AT1G15080 5.0kb downstream 5.0kb downstream 7048 true Chr1: 5187626-5194673 Arabidopsis thaliana
AT1G15080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5189674-5194673 Arabidopsis thaliana
AT1G15080 10.0kb upstream 10.0kb upstream 12048 true Chr1: 5177626-5189673 Arabidopsis thaliana
AT1G15080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5177626-5187625 Arabidopsis thaliana
AT1G15080 10.0kb downstream 10.0kb downstream 12048 true Chr1: 5187626-5199673 Arabidopsis thaliana
AT1G15080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5189674-5199673 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364782 5261 Brassicaceae View MSA
123833080 5264 Brassicales-Malvales View MSA
124343832 5266 SBM View MSA
124242855 5268 Malvidae View MSA
124064865 5270 Rosid View MSA
123740840 5271 Pentapetalae View MSA
122793689 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.562        
cufflinks 6.765        
cufflinks 0.766       Low
cufflinks 4.811        
cufflinks 0.82       Low
cufflinks 6.769        

0 Strain