Gene : AT1G14200 A. thaliana TAIR10
Defline:  (1 of 3) PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1413
Name:  ? AT1G14200 Secondary Identifier:  ? PAC:19653158
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G14200 0.5kb upstream 0.5kb upstream 1317 true Chr1: 4854384-4855700 Arabidopsis thaliana
AT1G14200 0.5kb upstream 0.5kb upstream 500 false Chr1: 4855201-4855700 Arabidopsis thaliana
AT1G14200 0.5kb downstream 0.5kb downstream 1317 true Chr1: 4853884-4855200 Arabidopsis thaliana
AT1G14200 0.5kb downstream 0.5kb downstream 500 false Chr1: 4853884-4854383 Arabidopsis thaliana
AT1G14200 1.0kb upstream 1.0kb upstream 1817 true Chr1: 4854384-4856200 Arabidopsis thaliana
AT1G14200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4855201-4856200 Arabidopsis thaliana
AT1G14200 1.0kb downstream 1.0kb downstream 1817 true Chr1: 4853384-4855200 Arabidopsis thaliana
AT1G14200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4853384-4854383 Arabidopsis thaliana
AT1G14200 2.0kb upstream 2.0kb upstream 2817 true Chr1: 4854384-4857200 Arabidopsis thaliana
AT1G14200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4855201-4857200 Arabidopsis thaliana
AT1G14200 2.0kb downstream 2.0kb downstream 2817 true Chr1: 4852384-4855200 Arabidopsis thaliana
AT1G14200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4852384-4854383 Arabidopsis thaliana
AT1G14200 5.0kb upstream 5.0kb upstream 5817 true Chr1: 4854384-4860200 Arabidopsis thaliana
AT1G14200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4855201-4860200 Arabidopsis thaliana
AT1G14200 5.0kb downstream 5.0kb downstream 5817 true Chr1: 4849384-4855200 Arabidopsis thaliana
AT1G14200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4849384-4854383 Arabidopsis thaliana
AT1G14200 10.0kb upstream 10.0kb upstream 10817 true Chr1: 4854384-4865200 Arabidopsis thaliana
AT1G14200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4855201-4865200 Arabidopsis thaliana
AT1G14200 10.0kb downstream 10.0kb downstream 10817 true Chr1: 4844384-4855200 Arabidopsis thaliana
AT1G14200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4844384-4854383 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370978 5261 Brassicaceae View MSA
123837934 5264 Brassicales-Malvales View MSA
124337851 5266 SBM View MSA
124240205 5268 Malvidae View MSA
124061034 5270 Rosid View MSA
123749515 5271 Pentapetalae View MSA
122792844 5272 Eudicot View MSA
122052093 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121312953 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.97     High High
cufflinks 8.339       Low
cufflinks 17.955        
cufflinks 18.5        
cufflinks 30.116     High  
cufflinks 14.033        

0 Strain