Gene : RUS3 A. thaliana TAIR10
Primary Identifier:  ? AT1G13770 Defline:  (1 of 1) PTHR12770:SF22 - UPF0420 PROTEIN C16ORF58
Genomic Order:  1372 Name:  ? AT1G13770
Secondary Identifier:  ? PAC:19657494
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13770 0.5kb upstream 0.5kb upstream 3316 true Chr1: 4721195-4724510 Arabidopsis thaliana
AT1G13770 0.5kb upstream 0.5kb upstream 500 false Chr1: 4721195-4721694 Arabidopsis thaliana
AT1G13770 0.5kb downstream 0.5kb downstream 3316 true Chr1: 4721695-4725010 Arabidopsis thaliana
AT1G13770 0.5kb downstream 0.5kb downstream 500 false Chr1: 4724511-4725010 Arabidopsis thaliana
AT1G13770 1.0kb upstream 1.0kb upstream 3816 true Chr1: 4720695-4724510 Arabidopsis thaliana
AT1G13770 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4720695-4721694 Arabidopsis thaliana
AT1G13770 1.0kb downstream 1.0kb downstream 3816 true Chr1: 4721695-4725510 Arabidopsis thaliana
AT1G13770 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4724511-4725510 Arabidopsis thaliana
AT1G13770 2.0kb upstream 2.0kb upstream 4816 true Chr1: 4719695-4724510 Arabidopsis thaliana
AT1G13770 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4719695-4721694 Arabidopsis thaliana
AT1G13770 2.0kb downstream 2.0kb downstream 4816 true Chr1: 4721695-4726510 Arabidopsis thaliana
AT1G13770 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4724511-4726510 Arabidopsis thaliana
AT1G13770 5.0kb upstream 5.0kb upstream 7816 true Chr1: 4716695-4724510 Arabidopsis thaliana
AT1G13770 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4716695-4721694 Arabidopsis thaliana
AT1G13770 5.0kb downstream 5.0kb downstream 7816 true Chr1: 4721695-4729510 Arabidopsis thaliana
AT1G13770 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4724511-4729510 Arabidopsis thaliana
AT1G13770 10.0kb upstream 10.0kb upstream 12816 true Chr1: 4711695-4724510 Arabidopsis thaliana
AT1G13770 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4711695-4721694 Arabidopsis thaliana
AT1G13770 10.0kb downstream 10.0kb downstream 12816 true Chr1: 4721695-4734510 Arabidopsis thaliana
AT1G13770 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4724511-4734510 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366075 5261 Brassicaceae View MSA
123841065 5264 Brassicales-Malvales View MSA
124342337 5266 SBM View MSA
124252208 5268 Malvidae View MSA
124065742 5270 Rosid View MSA
123743943 5271 Pentapetalae View MSA
122788740 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.509        
cufflinks 3.243       High
cufflinks 2.67        
cufflinks 3.259       High
cufflinks 2.173       Low
cufflinks 2.854        

0 Strain