Gene : AT1G13810 A. thaliana TAIR10
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  1376
Name:  ? AT1G13810 Secondary Identifier:  ? PAC:19651972
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13810 0.5kb upstream 0.5kb upstream 1854 true Chr1: 4733536-4735389 Arabidopsis thaliana
AT1G13810 0.5kb upstream 0.5kb upstream 500 false Chr1: 4733536-4734035 Arabidopsis thaliana
AT1G13810 0.5kb downstream 0.5kb downstream 1854 true Chr1: 4734036-4735889 Arabidopsis thaliana
AT1G13810 0.5kb downstream 0.5kb downstream 500 false Chr1: 4735390-4735889 Arabidopsis thaliana
AT1G13810 1.0kb upstream 1.0kb upstream 2354 true Chr1: 4733036-4735389 Arabidopsis thaliana
AT1G13810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4733036-4734035 Arabidopsis thaliana
AT1G13810 1.0kb downstream 1.0kb downstream 2354 true Chr1: 4734036-4736389 Arabidopsis thaliana
AT1G13810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4735390-4736389 Arabidopsis thaliana
AT1G13810 2.0kb upstream 2.0kb upstream 3354 true Chr1: 4732036-4735389 Arabidopsis thaliana
AT1G13810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4732036-4734035 Arabidopsis thaliana
AT1G13810 2.0kb downstream 2.0kb downstream 3354 true Chr1: 4734036-4737389 Arabidopsis thaliana
AT1G13810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4735390-4737389 Arabidopsis thaliana
AT1G13810 5.0kb upstream 5.0kb upstream 6354 true Chr1: 4729036-4735389 Arabidopsis thaliana
AT1G13810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4729036-4734035 Arabidopsis thaliana
AT1G13810 5.0kb downstream 5.0kb downstream 6354 true Chr1: 4734036-4740389 Arabidopsis thaliana
AT1G13810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4735390-4740389 Arabidopsis thaliana
AT1G13810 10.0kb upstream 10.0kb upstream 11354 true Chr1: 4724036-4735389 Arabidopsis thaliana
AT1G13810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4724036-4734035 Arabidopsis thaliana
AT1G13810 10.0kb downstream 10.0kb downstream 11354 true Chr1: 4734036-4745389 Arabidopsis thaliana
AT1G13810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4735390-4745389 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374278 5261 Brassicaceae View MSA
123839933 5264 Brassicales-Malvales View MSA
124338490 5266 SBM View MSA
124237169 5268 Malvidae View MSA
124067156 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.378        
cufflinks 5.254        
cufflinks 3.364        
cufflinks 5.63        
cufflinks 2.687       Low
cufflinks 5.398        

0 Strain