Gene : bZIP58 A. thaliana TAIR10
Primary Identifier:  ? AT1G13600 Defline:  (1 of 2) PTHR22952:SF110 - BZIP PROTEIN (ATBZIP48)-RELATED
Genomic Order:  1351 Name:  ? AT1G13600
Secondary Identifier:  ? PAC:19651980
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13600 0.5kb upstream 0.5kb upstream 1183 true Chr1: 4650787-4651969 Arabidopsis thaliana
AT1G13600 0.5kb upstream 0.5kb upstream 500 false Chr1: 4651470-4651969 Arabidopsis thaliana
AT1G13600 0.5kb downstream 0.5kb downstream 1183 true Chr1: 4650287-4651469 Arabidopsis thaliana
AT1G13600 0.5kb downstream 0.5kb downstream 500 false Chr1: 4650287-4650786 Arabidopsis thaliana
AT1G13600 1.0kb upstream 1.0kb upstream 1683 true Chr1: 4650787-4652469 Arabidopsis thaliana
AT1G13600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4651470-4652469 Arabidopsis thaliana
AT1G13600 1.0kb downstream 1.0kb downstream 1683 true Chr1: 4649787-4651469 Arabidopsis thaliana
AT1G13600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4649787-4650786 Arabidopsis thaliana
AT1G13600 2.0kb upstream 2.0kb upstream 2683 true Chr1: 4650787-4653469 Arabidopsis thaliana
AT1G13600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4651470-4653469 Arabidopsis thaliana
AT1G13600 2.0kb downstream 2.0kb downstream 2683 true Chr1: 4648787-4651469 Arabidopsis thaliana
AT1G13600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4648787-4650786 Arabidopsis thaliana
AT1G13600 5.0kb upstream 5.0kb upstream 5683 true Chr1: 4650787-4656469 Arabidopsis thaliana
AT1G13600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4651470-4656469 Arabidopsis thaliana
AT1G13600 5.0kb downstream 5.0kb downstream 5683 true Chr1: 4645787-4651469 Arabidopsis thaliana
AT1G13600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4645787-4650786 Arabidopsis thaliana
AT1G13600 10.0kb upstream 10.0kb upstream 10683 true Chr1: 4650787-4661469 Arabidopsis thaliana
AT1G13600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4651470-4661469 Arabidopsis thaliana
AT1G13600 10.0kb downstream 10.0kb downstream 10683 true Chr1: 4640787-4651469 Arabidopsis thaliana
AT1G13600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4640787-4650786 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365418 5261 Brassicaceae View MSA
123840763 5264 Brassicales-Malvales View MSA
124338284 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.39        
cufflinks 10.933        
cufflinks 0.188     Low Low
cufflinks 16.109       High
cufflinks 0.239     Low  
cufflinks 4.655        

0 Strain