Gene : AT1G13680 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13593:SF46 - F21F23.12 PROTEIN Genomic Order:  1363
Name:  ? AT1G13680 Secondary Identifier:  ? PAC:19655282
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13680 0.5kb upstream 0.5kb upstream 2933 true Chr1: 4689909-4692841 Arabidopsis thaliana
AT1G13680 0.5kb upstream 0.5kb upstream 500 false Chr1: 4689909-4690408 Arabidopsis thaliana
AT1G13680 0.5kb downstream 0.5kb downstream 2933 true Chr1: 4690409-4693341 Arabidopsis thaliana
AT1G13680 0.5kb downstream 0.5kb downstream 500 false Chr1: 4692842-4693341 Arabidopsis thaliana
AT1G13680 1.0kb upstream 1.0kb upstream 3433 true Chr1: 4689409-4692841 Arabidopsis thaliana
AT1G13680 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4689409-4690408 Arabidopsis thaliana
AT1G13680 1.0kb downstream 1.0kb downstream 3433 true Chr1: 4690409-4693841 Arabidopsis thaliana
AT1G13680 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4692842-4693841 Arabidopsis thaliana
AT1G13680 2.0kb upstream 2.0kb upstream 4433 true Chr1: 4688409-4692841 Arabidopsis thaliana
AT1G13680 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4688409-4690408 Arabidopsis thaliana
AT1G13680 2.0kb downstream 2.0kb downstream 4433 true Chr1: 4690409-4694841 Arabidopsis thaliana
AT1G13680 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4692842-4694841 Arabidopsis thaliana
AT1G13680 5.0kb upstream 5.0kb upstream 7433 true Chr1: 4685409-4692841 Arabidopsis thaliana
AT1G13680 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4685409-4690408 Arabidopsis thaliana
AT1G13680 5.0kb downstream 5.0kb downstream 7433 true Chr1: 4690409-4697841 Arabidopsis thaliana
AT1G13680 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4692842-4697841 Arabidopsis thaliana
AT1G13680 10.0kb upstream 10.0kb upstream 12433 true Chr1: 4680409-4692841 Arabidopsis thaliana
AT1G13680 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4680409-4690408 Arabidopsis thaliana
AT1G13680 10.0kb downstream 10.0kb downstream 12433 true Chr1: 4690409-4702841 Arabidopsis thaliana
AT1G13680 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4692842-4702841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376944 5261 Brassicaceae View MSA
123830201 5264 Brassicales-Malvales View MSA
124349669 5266 SBM View MSA
124247999 5268 Malvidae View MSA
124070438 5270 Rosid View MSA
123740952 5271 Pentapetalae View MSA
122794551 5272 Eudicot View MSA
122050722 5273 Angiosperm View MSA
121349197 5274 Embryophyte View MSA
123381212 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077     Low  
cufflinks 0.568       High
cufflinks 0.065     Low  
cufflinks 0.235     Low  
cufflinks 0.08     Low  
cufflinks 0.552       High

0 Strain