Gene : AT1G13390 A. thaliana TAIR10
Genomic Order:  1329 Name:  ? AT1G13390
Secondary Identifier:  ? PAC:19657176
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13390 0.5kb upstream 0.5kb upstream 2411 true Chr1: 4592481-4594891 Arabidopsis thaliana
AT1G13390 0.5kb upstream 0.5kb upstream 500 false Chr1: 4594392-4594891 Arabidopsis thaliana
AT1G13390 0.5kb downstream 0.5kb downstream 2411 true Chr1: 4591981-4594391 Arabidopsis thaliana
AT1G13390 0.5kb downstream 0.5kb downstream 500 false Chr1: 4591981-4592480 Arabidopsis thaliana
AT1G13390 1.0kb upstream 1.0kb upstream 2911 true Chr1: 4592481-4595391 Arabidopsis thaliana
AT1G13390 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4594392-4595391 Arabidopsis thaliana
AT1G13390 1.0kb downstream 1.0kb downstream 2911 true Chr1: 4591481-4594391 Arabidopsis thaliana
AT1G13390 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4591481-4592480 Arabidopsis thaliana
AT1G13390 2.0kb upstream 2.0kb upstream 3911 true Chr1: 4592481-4596391 Arabidopsis thaliana
AT1G13390 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4594392-4596391 Arabidopsis thaliana
AT1G13390 2.0kb downstream 2.0kb downstream 3911 true Chr1: 4590481-4594391 Arabidopsis thaliana
AT1G13390 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4590481-4592480 Arabidopsis thaliana
AT1G13390 5.0kb upstream 5.0kb upstream 6911 true Chr1: 4592481-4599391 Arabidopsis thaliana
AT1G13390 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4594392-4599391 Arabidopsis thaliana
AT1G13390 5.0kb downstream 5.0kb downstream 6911 true Chr1: 4587481-4594391 Arabidopsis thaliana
AT1G13390 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4587481-4592480 Arabidopsis thaliana
AT1G13390 10.0kb upstream 10.0kb upstream 11911 true Chr1: 4592481-4604391 Arabidopsis thaliana
AT1G13390 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4594392-4604391 Arabidopsis thaliana
AT1G13390 10.0kb downstream 10.0kb downstream 11911 true Chr1: 4582481-4594391 Arabidopsis thaliana
AT1G13390 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4582481-4592480 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372374 5261 Brassicaceae View MSA
123800347 5264 Brassicales-Malvales View MSA
124297767 5266 SBM View MSA
124149572 5268 Malvidae View MSA
123875357 5270 Rosid View MSA
123459190 5271 Pentapetalae View MSA
122494585 5272 Eudicot View MSA
122049029 5273 Angiosperm View MSA
121350987 5274 Embryophyte View MSA
123381959 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.408        
cufflinks 38.966     High High
cufflinks 15.238        
cufflinks 34.554     High  
cufflinks 13.657        
cufflinks 28.836        

0 Strain