Gene : AT1G13630 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1358
Name:  ? AT1G13630 Secondary Identifier:  ? PAC:19653228
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13630 0.5kb upstream 0.5kb upstream 3674 true Chr1: 4669784-4673457 Arabidopsis thaliana
AT1G13630 0.5kb upstream 0.5kb upstream 500 false Chr1: 4672958-4673457 Arabidopsis thaliana
AT1G13630 0.5kb downstream 0.5kb downstream 3674 true Chr1: 4669284-4672957 Arabidopsis thaliana
AT1G13630 0.5kb downstream 0.5kb downstream 500 false Chr1: 4669284-4669783 Arabidopsis thaliana
AT1G13630 1.0kb upstream 1.0kb upstream 4174 true Chr1: 4669784-4673957 Arabidopsis thaliana
AT1G13630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4672958-4673957 Arabidopsis thaliana
AT1G13630 1.0kb downstream 1.0kb downstream 4174 true Chr1: 4668784-4672957 Arabidopsis thaliana
AT1G13630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4668784-4669783 Arabidopsis thaliana
AT1G13630 2.0kb upstream 2.0kb upstream 5174 true Chr1: 4669784-4674957 Arabidopsis thaliana
AT1G13630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4672958-4674957 Arabidopsis thaliana
AT1G13630 2.0kb downstream 2.0kb downstream 5174 true Chr1: 4667784-4672957 Arabidopsis thaliana
AT1G13630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4667784-4669783 Arabidopsis thaliana
AT1G13630 5.0kb upstream 5.0kb upstream 8174 true Chr1: 4669784-4677957 Arabidopsis thaliana
AT1G13630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4672958-4677957 Arabidopsis thaliana
AT1G13630 5.0kb downstream 5.0kb downstream 8174 true Chr1: 4664784-4672957 Arabidopsis thaliana
AT1G13630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4664784-4669783 Arabidopsis thaliana
AT1G13630 10.0kb upstream 10.0kb upstream 13174 true Chr1: 4669784-4682957 Arabidopsis thaliana
AT1G13630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4672958-4682957 Arabidopsis thaliana
AT1G13630 10.0kb downstream 10.0kb downstream 13174 true Chr1: 4659784-4672957 Arabidopsis thaliana
AT1G13630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4659784-4669783 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362715 5261 Brassicaceae View MSA
123841697 5264 Brassicales-Malvales View MSA
124340137 5266 SBM View MSA
124240017 5268 Malvidae View MSA
124072513 5270 Rosid View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.592        
cufflinks 0.779        
cufflinks 0.566        
cufflinks 0.783        
cufflinks 0.455       Low
cufflinks 0.848       High

0 Strain