Gene : AT1G13190 A. thaliana TAIR10
Defline:  (1 of 2) K14398 - cleavage and polyadenylation specificity factor subunit 6/7 (CPSF6_7) Genomic Order:  1308
Name:  ? AT1G13190 Secondary Identifier:  ? PAC:19651979
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13190 0.5kb upstream 0.5kb upstream 3233 true Chr1: 4498381-4501613 Arabidopsis thaliana
AT1G13190 0.5kb upstream 0.5kb upstream 500 false Chr1: 4498381-4498880 Arabidopsis thaliana
AT1G13190 0.5kb downstream 0.5kb downstream 3233 true Chr1: 4498881-4502113 Arabidopsis thaliana
AT1G13190 0.5kb downstream 0.5kb downstream 500 false Chr1: 4501614-4502113 Arabidopsis thaliana
AT1G13190 1.0kb upstream 1.0kb upstream 3733 true Chr1: 4497881-4501613 Arabidopsis thaliana
AT1G13190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4497881-4498880 Arabidopsis thaliana
AT1G13190 1.0kb downstream 1.0kb downstream 3733 true Chr1: 4498881-4502613 Arabidopsis thaliana
AT1G13190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4501614-4502613 Arabidopsis thaliana
AT1G13190 2.0kb upstream 2.0kb upstream 4733 true Chr1: 4496881-4501613 Arabidopsis thaliana
AT1G13190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4496881-4498880 Arabidopsis thaliana
AT1G13190 2.0kb downstream 2.0kb downstream 4733 true Chr1: 4498881-4503613 Arabidopsis thaliana
AT1G13190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4501614-4503613 Arabidopsis thaliana
AT1G13190 5.0kb upstream 5.0kb upstream 7733 true Chr1: 4493881-4501613 Arabidopsis thaliana
AT1G13190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4493881-4498880 Arabidopsis thaliana
AT1G13190 5.0kb downstream 5.0kb downstream 7733 true Chr1: 4498881-4506613 Arabidopsis thaliana
AT1G13190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4501614-4506613 Arabidopsis thaliana
AT1G13190 10.0kb upstream 10.0kb upstream 12733 true Chr1: 4488881-4501613 Arabidopsis thaliana
AT1G13190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4488881-4498880 Arabidopsis thaliana
AT1G13190 10.0kb downstream 10.0kb downstream 12733 true Chr1: 4498881-4511613 Arabidopsis thaliana
AT1G13190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4501614-4511613 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372809 5261 Brassicaceae View MSA
123831687 5264 Brassicales-Malvales View MSA
124350571 5266 SBM View MSA
124251712 5268 Malvidae View MSA
124074080 5270 Rosid View MSA
123752674 5271 Pentapetalae View MSA
122796288 5272 Eudicot View MSA
122042872 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349327 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.983        
cufflinks 22.518       Low
cufflinks 33.571     High High
cufflinks 26.813        
cufflinks 33.628     High High
cufflinks 22.881        

0 Strain