Gene : AO4 A. thaliana TAIR10
Primary Identifier:  ? AT1G04580 Defline:  (1 of 2) 1.2.1.28//1.2.3.1//1.2.3.7 - Benzaldehyde dehydrogenase (NAD(+)) // Aldehyde oxidase / Retinal oxidase // Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase
Genomic Order:  374 Name:  ? AT1G04580
Secondary Identifier:  ? PAC:19654411
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04580 0.5kb upstream 0.5kb upstream 5889 true Chr1: 1252122-1258010 Arabidopsis thaliana
AT1G04580 0.5kb upstream 0.5kb upstream 500 false Chr1: 1257511-1258010 Arabidopsis thaliana
AT1G04580 0.5kb downstream 0.5kb downstream 5889 true Chr1: 1251622-1257510 Arabidopsis thaliana
AT1G04580 0.5kb downstream 0.5kb downstream 500 false Chr1: 1251622-1252121 Arabidopsis thaliana
AT1G04580 1.0kb upstream 1.0kb upstream 6389 true Chr1: 1252122-1258510 Arabidopsis thaliana
AT1G04580 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1257511-1258510 Arabidopsis thaliana
AT1G04580 1.0kb downstream 1.0kb downstream 6389 true Chr1: 1251122-1257510 Arabidopsis thaliana
AT1G04580 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1251122-1252121 Arabidopsis thaliana
AT1G04580 2.0kb upstream 2.0kb upstream 7389 true Chr1: 1252122-1259510 Arabidopsis thaliana
AT1G04580 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1257511-1259510 Arabidopsis thaliana
AT1G04580 2.0kb downstream 2.0kb downstream 7389 true Chr1: 1250122-1257510 Arabidopsis thaliana
AT1G04580 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1250122-1252121 Arabidopsis thaliana
AT1G04580 5.0kb upstream 5.0kb upstream 10389 true Chr1: 1252122-1262510 Arabidopsis thaliana
AT1G04580 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1257511-1262510 Arabidopsis thaliana
AT1G04580 5.0kb downstream 5.0kb downstream 10389 true Chr1: 1247122-1257510 Arabidopsis thaliana
AT1G04580 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1247122-1252121 Arabidopsis thaliana
AT1G04580 10.0kb upstream 10.0kb upstream 15389 true Chr1: 1252122-1267510 Arabidopsis thaliana
AT1G04580 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1257511-1267510 Arabidopsis thaliana
AT1G04580 10.0kb downstream 10.0kb downstream 15389 true Chr1: 1242122-1257510 Arabidopsis thaliana
AT1G04580 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1242122-1252121 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372939 5261 Brassicaceae View MSA
123839082 5264 Brassicales-Malvales View MSA
124342435 5266 SBM View MSA
124239057 5268 Malvidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158     Low  
cufflinks 0.088     Low Low
cufflinks 0.15     Low  
cufflinks 0.191     Low  
cufflinks 0.701       High
cufflinks 0.146     Low  

0 Strain