Gene : PDLP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G04520 Defline:  (1 of 3) PTHR32080:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11-RELATED
Genomic Order:  367 Name:  ? AT1G04520
Secondary Identifier:  ? PAC:19651753
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04520 0.5kb upstream 0.5kb upstream 2955 true Chr1: 1231078-1234032 Arabidopsis thaliana
AT1G04520 0.5kb upstream 0.5kb upstream 500 false Chr1: 1231078-1231577 Arabidopsis thaliana
AT1G04520 0.5kb downstream 0.5kb downstream 2955 true Chr1: 1231578-1234532 Arabidopsis thaliana
AT1G04520 0.5kb downstream 0.5kb downstream 500 false Chr1: 1234033-1234532 Arabidopsis thaliana
AT1G04520 1.0kb upstream 1.0kb upstream 3455 true Chr1: 1230578-1234032 Arabidopsis thaliana
AT1G04520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1230578-1231577 Arabidopsis thaliana
AT1G04520 1.0kb downstream 1.0kb downstream 3455 true Chr1: 1231578-1235032 Arabidopsis thaliana
AT1G04520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1234033-1235032 Arabidopsis thaliana
AT1G04520 2.0kb upstream 2.0kb upstream 4455 true Chr1: 1229578-1234032 Arabidopsis thaliana
AT1G04520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1229578-1231577 Arabidopsis thaliana
AT1G04520 2.0kb downstream 2.0kb downstream 4455 true Chr1: 1231578-1236032 Arabidopsis thaliana
AT1G04520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1234033-1236032 Arabidopsis thaliana
AT1G04520 5.0kb upstream 5.0kb upstream 7455 true Chr1: 1226578-1234032 Arabidopsis thaliana
AT1G04520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1226578-1231577 Arabidopsis thaliana
AT1G04520 5.0kb downstream 5.0kb downstream 7455 true Chr1: 1231578-1239032 Arabidopsis thaliana
AT1G04520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1234033-1239032 Arabidopsis thaliana
AT1G04520 10.0kb upstream 10.0kb upstream 12455 true Chr1: 1221578-1234032 Arabidopsis thaliana
AT1G04520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1221578-1231577 Arabidopsis thaliana
AT1G04520 10.0kb downstream 10.0kb downstream 12455 true Chr1: 1231578-1244032 Arabidopsis thaliana
AT1G04520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1234033-1244032 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040946 5273 Angiosperm View MSA
122374359 5261 Brassicaceae View MSA
123832559 5264 Brassicales-Malvales View MSA
124338578 5266 SBM View MSA
124254394 5268 Malvidae View MSA
124064620 5270 Rosid View MSA
123743595 5271 Pentapetalae View MSA
122793382 5272 Eudicot View MSA
121309775 5274 Embryophyte View MSA
123347437 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39        
cufflinks 5.285        
cufflinks 3.712        
cufflinks 7.279        
cufflinks 2.144       Low
cufflinks 9.099       High

0 Strain