Gene : ABCC5 A. thaliana TAIR10
Primary Identifier:  ? AT1G04120 Defline:  (1 of 1) PTHR24223:SF189 - ABC TRANSPORTER C FAMILY MEMBER 5
Genomic Order:  326 Name:  ? AT1G04120
Secondary Identifier:  ? PAC:19649713
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04120 0.5kb upstream 0.5kb upstream 7098 true Chr1: 1064450-1071547 Arabidopsis thaliana
AT1G04120 0.5kb upstream 0.5kb upstream 500 false Chr1: 1071048-1071547 Arabidopsis thaliana
AT1G04120 0.5kb downstream 0.5kb downstream 7098 true Chr1: 1063950-1071047 Arabidopsis thaliana
AT1G04120 0.5kb downstream 0.5kb downstream 500 false Chr1: 1063950-1064449 Arabidopsis thaliana
AT1G04120 1.0kb upstream 1.0kb upstream 7598 true Chr1: 1064450-1072047 Arabidopsis thaliana
AT1G04120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1071048-1072047 Arabidopsis thaliana
AT1G04120 1.0kb downstream 1.0kb downstream 7598 true Chr1: 1063450-1071047 Arabidopsis thaliana
AT1G04120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1063450-1064449 Arabidopsis thaliana
AT1G04120 2.0kb upstream 2.0kb upstream 8598 true Chr1: 1064450-1073047 Arabidopsis thaliana
AT1G04120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1071048-1073047 Arabidopsis thaliana
AT1G04120 2.0kb downstream 2.0kb downstream 8598 true Chr1: 1062450-1071047 Arabidopsis thaliana
AT1G04120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1062450-1064449 Arabidopsis thaliana
AT1G04120 5.0kb upstream 5.0kb upstream 11598 true Chr1: 1064450-1076047 Arabidopsis thaliana
AT1G04120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1071048-1076047 Arabidopsis thaliana
AT1G04120 5.0kb downstream 5.0kb downstream 11598 true Chr1: 1059450-1071047 Arabidopsis thaliana
AT1G04120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1059450-1064449 Arabidopsis thaliana
AT1G04120 10.0kb upstream 10.0kb upstream 16598 true Chr1: 1064450-1081047 Arabidopsis thaliana
AT1G04120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1071048-1081047 Arabidopsis thaliana
AT1G04120 10.0kb downstream 10.0kb downstream 16598 true Chr1: 1054450-1071047 Arabidopsis thaliana
AT1G04120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1054450-1064449 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366354 5261 Brassicaceae View MSA
123831011 5264 Brassicales-Malvales View MSA
124336527 5266 SBM View MSA
124249807 5268 Malvidae View MSA
124062318 5270 Rosid View MSA
123738711 5271 Pentapetalae View MSA
122797524 5272 Eudicot View MSA
122042254 5273 Angiosperm View MSA
121346064 5274 Embryophyte View MSA
123380316 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.573        
cufflinks 17.836        
cufflinks 4.681       Low
cufflinks 19.972       High
cufflinks 4.711       Low
cufflinks 17.825        

0 Strain