Gene : RPS15 A. thaliana TAIR10
Primary Identifier:  ? AT1G04270 Defline:  (1 of 7) K02958 - small subunit ribosomal protein S15e (RP-S15e, RPS15)
Genomic Order:  342 Name:  ? AT1G04270
Secondary Identifier:  ? PAC:19658295
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04270 0.5kb upstream 0.5kb upstream 1950 true Chr1: 1141604-1143553 Arabidopsis thaliana
AT1G04270 0.5kb upstream 0.5kb upstream 500 false Chr1: 1143054-1143553 Arabidopsis thaliana
AT1G04270 0.5kb downstream 0.5kb downstream 1950 true Chr1: 1141104-1143053 Arabidopsis thaliana
AT1G04270 0.5kb downstream 0.5kb downstream 500 false Chr1: 1141104-1141603 Arabidopsis thaliana
AT1G04270 1.0kb upstream 1.0kb upstream 2450 true Chr1: 1141604-1144053 Arabidopsis thaliana
AT1G04270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1143054-1144053 Arabidopsis thaliana
AT1G04270 1.0kb downstream 1.0kb downstream 2450 true Chr1: 1140604-1143053 Arabidopsis thaliana
AT1G04270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1140604-1141603 Arabidopsis thaliana
AT1G04270 2.0kb upstream 2.0kb upstream 3450 true Chr1: 1141604-1145053 Arabidopsis thaliana
AT1G04270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1143054-1145053 Arabidopsis thaliana
AT1G04270 2.0kb downstream 2.0kb downstream 3450 true Chr1: 1139604-1143053 Arabidopsis thaliana
AT1G04270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1139604-1141603 Arabidopsis thaliana
AT1G04270 5.0kb upstream 5.0kb upstream 6450 true Chr1: 1141604-1148053 Arabidopsis thaliana
AT1G04270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1143054-1148053 Arabidopsis thaliana
AT1G04270 5.0kb downstream 5.0kb downstream 6450 true Chr1: 1136604-1143053 Arabidopsis thaliana
AT1G04270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1136604-1141603 Arabidopsis thaliana
AT1G04270 10.0kb upstream 10.0kb upstream 11450 true Chr1: 1141604-1153053 Arabidopsis thaliana
AT1G04270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1143054-1153053 Arabidopsis thaliana
AT1G04270 10.0kb downstream 10.0kb downstream 11450 true Chr1: 1131604-1143053 Arabidopsis thaliana
AT1G04270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1131604-1141603 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378956 5261 Brassicaceae View MSA
123834397 5264 Brassicales-Malvales View MSA
124339038 5266 SBM View MSA
124247186 5268 Malvidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.3     High  
cufflinks 111.496     High  
cufflinks 75.218     High  
cufflinks 118.625     High  
cufflinks 65.061     High Low
cufflinks 135.682     High High

0 Strain