Gene : BARD1 A. thaliana TAIR10
Primary Identifier:  ? AT1G04020 Defline:  (1 of 2) K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1)
Genomic Order:  317 Name:  ? AT1G04020
Secondary Identifier:  ? PAC:19657210
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04020 0.5kb upstream 0.5kb upstream 4188 true Chr1: 1036037-1040224 Arabidopsis thaliana
AT1G04020 0.5kb upstream 0.5kb upstream 500 false Chr1: 1036037-1036536 Arabidopsis thaliana
AT1G04020 0.5kb downstream 0.5kb downstream 4188 true Chr1: 1036537-1040724 Arabidopsis thaliana
AT1G04020 0.5kb downstream 0.5kb downstream 500 false Chr1: 1040225-1040724 Arabidopsis thaliana
AT1G04020 1.0kb upstream 1.0kb upstream 4688 true Chr1: 1035537-1040224 Arabidopsis thaliana
AT1G04020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1035537-1036536 Arabidopsis thaliana
AT1G04020 1.0kb downstream 1.0kb downstream 4688 true Chr1: 1036537-1041224 Arabidopsis thaliana
AT1G04020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1040225-1041224 Arabidopsis thaliana
AT1G04020 2.0kb upstream 2.0kb upstream 5688 true Chr1: 1034537-1040224 Arabidopsis thaliana
AT1G04020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1034537-1036536 Arabidopsis thaliana
AT1G04020 2.0kb downstream 2.0kb downstream 5688 true Chr1: 1036537-1042224 Arabidopsis thaliana
AT1G04020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1040225-1042224 Arabidopsis thaliana
AT1G04020 5.0kb upstream 5.0kb upstream 8688 true Chr1: 1031537-1040224 Arabidopsis thaliana
AT1G04020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1031537-1036536 Arabidopsis thaliana
AT1G04020 5.0kb downstream 5.0kb downstream 8688 true Chr1: 1036537-1045224 Arabidopsis thaliana
AT1G04020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1040225-1045224 Arabidopsis thaliana
AT1G04020 10.0kb upstream 10.0kb upstream 13688 true Chr1: 1026537-1040224 Arabidopsis thaliana
AT1G04020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1026537-1036536 Arabidopsis thaliana
AT1G04020 10.0kb downstream 10.0kb downstream 13688 true Chr1: 1036537-1050224 Arabidopsis thaliana
AT1G04020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1040225-1050224 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368475 5261 Brassicaceae View MSA
123832266 5264 Brassicales-Malvales View MSA
124344562 5266 SBM View MSA
124249547 5268 Malvidae View MSA
124074324 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.486        
cufflinks 1.598        
cufflinks 1.183        
cufflinks 1.616        
cufflinks 0.861       Low
cufflinks 2.35       High

0 Strain