Gene : PCS2 A. thaliana TAIR10
Primary Identifier:  ? AT1G03980 Defline:  (1 of 2) K05941 - glutathione gamma-glutamylcysteinyltransferase (E2.3.2.15)
Genomic Order:  312 Name:  ? AT1G03980
Secondary Identifier:  ? PAC:19652275
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6745 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G03980 0.5kb upstream 0.5kb upstream 4039 true Chr1: 1018570-1022608 Arabidopsis thaliana
AT1G03980 0.5kb upstream 0.5kb upstream 500 false Chr1: 1022109-1022608 Arabidopsis thaliana
AT1G03980 0.5kb downstream 0.5kb downstream 4039 true Chr1: 1018070-1022108 Arabidopsis thaliana
AT1G03980 0.5kb downstream 0.5kb downstream 500 false Chr1: 1018070-1018569 Arabidopsis thaliana
AT1G03980 1.0kb upstream 1.0kb upstream 4539 true Chr1: 1018570-1023108 Arabidopsis thaliana
AT1G03980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1022109-1023108 Arabidopsis thaliana
AT1G03980 1.0kb downstream 1.0kb downstream 4539 true Chr1: 1017570-1022108 Arabidopsis thaliana
AT1G03980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1017570-1018569 Arabidopsis thaliana
AT1G03980 2.0kb upstream 2.0kb upstream 5539 true Chr1: 1018570-1024108 Arabidopsis thaliana
AT1G03980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1022109-1024108 Arabidopsis thaliana
AT1G03980 2.0kb downstream 2.0kb downstream 5539 true Chr1: 1016570-1022108 Arabidopsis thaliana
AT1G03980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1016570-1018569 Arabidopsis thaliana
AT1G03980 5.0kb upstream 5.0kb upstream 8539 true Chr1: 1018570-1027108 Arabidopsis thaliana
AT1G03980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1022109-1027108 Arabidopsis thaliana
AT1G03980 5.0kb downstream 5.0kb downstream 8539 true Chr1: 1013570-1022108 Arabidopsis thaliana
AT1G03980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1013570-1018569 Arabidopsis thaliana
AT1G03980 10.0kb upstream 10.0kb upstream 13539 true Chr1: 1018570-1032108 Arabidopsis thaliana
AT1G03980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1022109-1032108 Arabidopsis thaliana
AT1G03980 10.0kb downstream 10.0kb downstream 13539 true Chr1: 1008570-1022108 Arabidopsis thaliana
AT1G03980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1008570-1018569 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029935 5273 Angiosperm View MSA
122378047 5261 Brassicaceae View MSA
123801724 5264 Brassicales-Malvales View MSA
124298997 5266 SBM View MSA
124150517 5268 Malvidae View MSA
124051540 5270 Rosid View MSA
123620201 5271 Pentapetalae View MSA
122654615 5272 Eudicot View MSA
121299186 5274 Embryophyte View MSA
123337095 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336        
cufflinks 0.822        
cufflinks 0.321        
cufflinks 0.925        
cufflinks 0.191     Low Low
cufflinks 1.121       High

0 Strain