Gene : AT1G03890 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  302
Name:  ? AT1G03890 Secondary Identifier:  ? PAC:19649652
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G03890 0.5kb upstream 0.5kb upstream 2323 true Chr1: 988698-991020 Arabidopsis thaliana
AT1G03890 0.5kb upstream 0.5kb upstream 500 false Chr1: 988698-989197 Arabidopsis thaliana
AT1G03890 0.5kb downstream 0.5kb downstream 2323 true Chr1: 989198-991520 Arabidopsis thaliana
AT1G03890 0.5kb downstream 0.5kb downstream 500 false Chr1: 991021-991520 Arabidopsis thaliana
AT1G03890 1.0kb upstream 1.0kb upstream 2823 true Chr1: 988198-991020 Arabidopsis thaliana
AT1G03890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 988198-989197 Arabidopsis thaliana
AT1G03890 1.0kb downstream 1.0kb downstream 2823 true Chr1: 989198-992020 Arabidopsis thaliana
AT1G03890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 991021-992020 Arabidopsis thaliana
AT1G03890 2.0kb upstream 2.0kb upstream 3823 true Chr1: 987198-991020 Arabidopsis thaliana
AT1G03890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 987198-989197 Arabidopsis thaliana
AT1G03890 2.0kb downstream 2.0kb downstream 3823 true Chr1: 989198-993020 Arabidopsis thaliana
AT1G03890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 991021-993020 Arabidopsis thaliana
AT1G03890 5.0kb upstream 5.0kb upstream 6823 true Chr1: 984198-991020 Arabidopsis thaliana
AT1G03890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 984198-989197 Arabidopsis thaliana
AT1G03890 5.0kb downstream 5.0kb downstream 6823 true Chr1: 989198-996020 Arabidopsis thaliana
AT1G03890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 991021-996020 Arabidopsis thaliana
AT1G03890 10.0kb upstream 10.0kb upstream 11823 true Chr1: 979198-991020 Arabidopsis thaliana
AT1G03890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 979198-989197 Arabidopsis thaliana
AT1G03890 10.0kb downstream 10.0kb downstream 11823 true Chr1: 989198-1001020 Arabidopsis thaliana
AT1G03890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 991021-1001020 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374546 5261 Brassicaceae View MSA
123800774 5264 Brassicales-Malvales View MSA
124350011 5266 SBM View MSA
124254285 5268 Malvidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain