Gene : ATG18G A. thaliana TAIR10
Primary Identifier:  ? AT1G03380 Defline:  (1 of 1) PTHR13268//PTHR13268:SF2 - BREAST CARCINOMA AMPLIFIED SEQUENCE 3 // AUTOPHAGY-RELATED PROTEIN 18G
Genomic Order:  255 Name:  ? AT1G03380
Secondary Identifier:  ? PAC:19656957
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G03380 0.5kb upstream 0.5kb upstream 5656 true Chr1: 835285-840940 Arabidopsis thaliana
AT1G03380 0.5kb upstream 0.5kb upstream 500 false Chr1: 835285-835784 Arabidopsis thaliana
AT1G03380 0.5kb downstream 0.5kb downstream 5656 true Chr1: 835785-841440 Arabidopsis thaliana
AT1G03380 0.5kb downstream 0.5kb downstream 500 false Chr1: 840941-841440 Arabidopsis thaliana
AT1G03380 1.0kb upstream 1.0kb upstream 6156 true Chr1: 834785-840940 Arabidopsis thaliana
AT1G03380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 834785-835784 Arabidopsis thaliana
AT1G03380 1.0kb downstream 1.0kb downstream 6156 true Chr1: 835785-841940 Arabidopsis thaliana
AT1G03380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 840941-841940 Arabidopsis thaliana
AT1G03380 2.0kb upstream 2.0kb upstream 7156 true Chr1: 833785-840940 Arabidopsis thaliana
AT1G03380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 833785-835784 Arabidopsis thaliana
AT1G03380 2.0kb downstream 2.0kb downstream 7156 true Chr1: 835785-842940 Arabidopsis thaliana
AT1G03380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 840941-842940 Arabidopsis thaliana
AT1G03380 5.0kb upstream 5.0kb upstream 10156 true Chr1: 830785-840940 Arabidopsis thaliana
AT1G03380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 830785-835784 Arabidopsis thaliana
AT1G03380 5.0kb downstream 5.0kb downstream 10156 true Chr1: 835785-845940 Arabidopsis thaliana
AT1G03380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 840941-845940 Arabidopsis thaliana
AT1G03380 10.0kb upstream 10.0kb upstream 15156 true Chr1: 825785-840940 Arabidopsis thaliana
AT1G03380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 825785-835784 Arabidopsis thaliana
AT1G03380 10.0kb downstream 10.0kb downstream 15156 true Chr1: 835785-850940 Arabidopsis thaliana
AT1G03380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 840941-850940 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370747 5261 Brassicaceae View MSA
123832418 5264 Brassicales-Malvales View MSA
124341740 5266 SBM View MSA
124244639 5268 Malvidae View MSA
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.702        
cufflinks 10.107        
cufflinks 14.866        
cufflinks 11.438        
cufflinks 19.294       High
cufflinks 8.148       Low

0 Strain