Gene : MCCA A. thaliana TAIR10
Primary Identifier:  ? AT1G03090 Defline:  (1 of 1) K01968 - 3-methylcrotonyl-CoA carboxylase alpha subunit (E6.4.1.4A)
Genomic Order:  223 Name:  ? AT1G03090
Secondary Identifier:  ? PAC:19649739
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LEU-DEG2-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G03090 0.5kb upstream 0.5kb upstream 5006 true Chr1: 739179-744184 Arabidopsis thaliana
AT1G03090 0.5kb upstream 0.5kb upstream 500 false Chr1: 739179-739678 Arabidopsis thaliana
AT1G03090 0.5kb downstream 0.5kb downstream 5006 true Chr1: 739679-744684 Arabidopsis thaliana
AT1G03090 0.5kb downstream 0.5kb downstream 500 false Chr1: 744185-744684 Arabidopsis thaliana
AT1G03090 1.0kb upstream 1.0kb upstream 5506 true Chr1: 738679-744184 Arabidopsis thaliana
AT1G03090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 738679-739678 Arabidopsis thaliana
AT1G03090 1.0kb downstream 1.0kb downstream 5506 true Chr1: 739679-745184 Arabidopsis thaliana
AT1G03090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 744185-745184 Arabidopsis thaliana
AT1G03090 2.0kb upstream 2.0kb upstream 6506 true Chr1: 737679-744184 Arabidopsis thaliana
AT1G03090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 737679-739678 Arabidopsis thaliana
AT1G03090 2.0kb downstream 2.0kb downstream 6506 true Chr1: 739679-746184 Arabidopsis thaliana
AT1G03090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 744185-746184 Arabidopsis thaliana
AT1G03090 5.0kb upstream 5.0kb upstream 9506 true Chr1: 734679-744184 Arabidopsis thaliana
AT1G03090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 734679-739678 Arabidopsis thaliana
AT1G03090 5.0kb downstream 5.0kb downstream 9506 true Chr1: 739679-749184 Arabidopsis thaliana
AT1G03090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 744185-749184 Arabidopsis thaliana
AT1G03090 10.0kb upstream 10.0kb upstream 14506 true Chr1: 729679-744184 Arabidopsis thaliana
AT1G03090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 729679-739678 Arabidopsis thaliana
AT1G03090 10.0kb downstream 10.0kb downstream 14506 true Chr1: 739679-754184 Arabidopsis thaliana
AT1G03090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 744185-754184 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373032 5261 Brassicaceae View MSA
123827845 5264 Brassicales-Malvales View MSA
124337820 5266 SBM View MSA
124239007 5268 Malvidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.891        
cufflinks 4.199        
cufflinks 10.168       High
cufflinks 4.774        
cufflinks 10.359       High
cufflinks 3.466        

0 Strain