Gene : TPK1 A. thaliana TAIR10
Primary Identifier:  ? AT1G02880 Defline:  (1 of 1) PTHR13622//PTHR13622:SF6//PTHR13622:SF7 - THIAMIN PYROPHOSPHOKINASE // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED
Genomic Order:  199 Name:  ? AT1G02880
Secondary Identifier:  ? PAC:19656173
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6908 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02880 0.5kb upstream 0.5kb upstream 2652 true Chr1: 642752-645403 Arabidopsis thaliana
AT1G02880 0.5kb upstream 0.5kb upstream 500 false Chr1: 644904-645403 Arabidopsis thaliana
AT1G02880 0.5kb downstream 0.5kb downstream 2652 true Chr1: 642252-644903 Arabidopsis thaliana
AT1G02880 0.5kb downstream 0.5kb downstream 500 false Chr1: 642252-642751 Arabidopsis thaliana
AT1G02880 1.0kb upstream 1.0kb upstream 3152 true Chr1: 642752-645903 Arabidopsis thaliana
AT1G02880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 644904-645903 Arabidopsis thaliana
AT1G02880 1.0kb downstream 1.0kb downstream 3152 true Chr1: 641752-644903 Arabidopsis thaliana
AT1G02880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 641752-642751 Arabidopsis thaliana
AT1G02880 2.0kb upstream 2.0kb upstream 4152 true Chr1: 642752-646903 Arabidopsis thaliana
AT1G02880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 644904-646903 Arabidopsis thaliana
AT1G02880 2.0kb downstream 2.0kb downstream 4152 true Chr1: 640752-644903 Arabidopsis thaliana
AT1G02880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 640752-642751 Arabidopsis thaliana
AT1G02880 5.0kb upstream 5.0kb upstream 7152 true Chr1: 642752-649903 Arabidopsis thaliana
AT1G02880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 644904-649903 Arabidopsis thaliana
AT1G02880 5.0kb downstream 5.0kb downstream 7152 true Chr1: 637752-644903 Arabidopsis thaliana
AT1G02880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 637752-642751 Arabidopsis thaliana
AT1G02880 10.0kb upstream 10.0kb upstream 12152 true Chr1: 642752-654903 Arabidopsis thaliana
AT1G02880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 644904-654903 Arabidopsis thaliana
AT1G02880 10.0kb downstream 10.0kb downstream 12152 true Chr1: 632752-644903 Arabidopsis thaliana
AT1G02880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 632752-642751 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378270 5261 Brassicaceae View MSA
123837799 5264 Brassicales-Malvales View MSA
124337669 5266 SBM View MSA
124238319 5268 Malvidae View MSA
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.151       High
cufflinks 2.373        
cufflinks 2.976        
cufflinks 2.709        
cufflinks 2.514        
cufflinks 2.286       Low

0 Strain