Gene : CLPP5 A. thaliana TAIR10
Primary Identifier:  ? AT1G02560 Defline:  (1 of 1) PTHR10381//PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC
Genomic Order:  166 Name:  ? AT1G02560
Secondary Identifier:  ? PAC:19655915
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02560 0.5kb upstream 0.5kb upstream 2750 true Chr1: 537360-540109 Arabidopsis thaliana
AT1G02560 0.5kb upstream 0.5kb upstream 500 false Chr1: 537360-537859 Arabidopsis thaliana
AT1G02560 0.5kb downstream 0.5kb downstream 2750 true Chr1: 537860-540609 Arabidopsis thaliana
AT1G02560 0.5kb downstream 0.5kb downstream 500 false Chr1: 540110-540609 Arabidopsis thaliana
AT1G02560 1.0kb upstream 1.0kb upstream 3250 true Chr1: 536860-540109 Arabidopsis thaliana
AT1G02560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 536860-537859 Arabidopsis thaliana
AT1G02560 1.0kb downstream 1.0kb downstream 3250 true Chr1: 537860-541109 Arabidopsis thaliana
AT1G02560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 540110-541109 Arabidopsis thaliana
AT1G02560 2.0kb upstream 2.0kb upstream 4250 true Chr1: 535860-540109 Arabidopsis thaliana
AT1G02560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 535860-537859 Arabidopsis thaliana
AT1G02560 2.0kb downstream 2.0kb downstream 4250 true Chr1: 537860-542109 Arabidopsis thaliana
AT1G02560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 540110-542109 Arabidopsis thaliana
AT1G02560 5.0kb upstream 5.0kb upstream 7250 true Chr1: 532860-540109 Arabidopsis thaliana
AT1G02560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 532860-537859 Arabidopsis thaliana
AT1G02560 5.0kb downstream 5.0kb downstream 7250 true Chr1: 537860-545109 Arabidopsis thaliana
AT1G02560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 540110-545109 Arabidopsis thaliana
AT1G02560 10.0kb upstream 10.0kb upstream 12250 true Chr1: 527860-540109 Arabidopsis thaliana
AT1G02560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 527860-537859 Arabidopsis thaliana
AT1G02560 10.0kb downstream 10.0kb downstream 12250 true Chr1: 537860-550109 Arabidopsis thaliana
AT1G02560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 540110-550109 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368465 5261 Brassicaceae View MSA
123827737 5264 Brassicales-Malvales View MSA
124337563 5266 SBM View MSA
124252870 5268 Malvidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 133.069     High  
cufflinks 27.971        
cufflinks 155.45     High  
cufflinks 27.723        
cufflinks 155.897     High  
cufflinks 28.898        

0 Strain