Gene : AT1G02475 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  158
Name:  ? AT1G02475 Secondary Identifier:  ? PAC:19649866
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02475 0.5kb upstream 0.5kb upstream 2062 true Chr1: 513843-515904 Arabidopsis thaliana
AT1G02475 0.5kb upstream 0.5kb upstream 500 false Chr1: 515405-515904 Arabidopsis thaliana
AT1G02475 0.5kb downstream 0.5kb downstream 2062 true Chr1: 513343-515404 Arabidopsis thaliana
AT1G02475 0.5kb downstream 0.5kb downstream 500 false Chr1: 513343-513842 Arabidopsis thaliana
AT1G02475 1.0kb upstream 1.0kb upstream 2562 true Chr1: 513843-516404 Arabidopsis thaliana
AT1G02475 1.0kb upstream 1.0kb upstream 1000 false Chr1: 515405-516404 Arabidopsis thaliana
AT1G02475 1.0kb downstream 1.0kb downstream 2562 true Chr1: 512843-515404 Arabidopsis thaliana
AT1G02475 1.0kb downstream 1.0kb downstream 1000 false Chr1: 512843-513842 Arabidopsis thaliana
AT1G02475 2.0kb upstream 2.0kb upstream 3562 true Chr1: 513843-517404 Arabidopsis thaliana
AT1G02475 2.0kb upstream 2.0kb upstream 2000 false Chr1: 515405-517404 Arabidopsis thaliana
AT1G02475 2.0kb downstream 2.0kb downstream 3562 true Chr1: 511843-515404 Arabidopsis thaliana
AT1G02475 2.0kb downstream 2.0kb downstream 2000 false Chr1: 511843-513842 Arabidopsis thaliana
AT1G02475 5.0kb upstream 5.0kb upstream 6562 true Chr1: 513843-520404 Arabidopsis thaliana
AT1G02475 5.0kb upstream 5.0kb upstream 5000 false Chr1: 515405-520404 Arabidopsis thaliana
AT1G02475 5.0kb downstream 5.0kb downstream 6562 true Chr1: 508843-515404 Arabidopsis thaliana
AT1G02475 5.0kb downstream 5.0kb downstream 5000 false Chr1: 508843-513842 Arabidopsis thaliana
AT1G02475 10.0kb upstream 10.0kb upstream 11562 true Chr1: 513843-525404 Arabidopsis thaliana
AT1G02475 10.0kb upstream 10.0kb upstream 10000 false Chr1: 515405-525404 Arabidopsis thaliana
AT1G02475 10.0kb downstream 10.0kb downstream 11562 true Chr1: 503843-515404 Arabidopsis thaliana
AT1G02475 10.0kb downstream 10.0kb downstream 10000 false Chr1: 503843-513842 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366547 5261 Brassicaceae View MSA
123831729 5264 Brassicales-Malvales View MSA
124340151 5266 SBM View MSA
124239054 5268 Malvidae View MSA
124063250 5270 Rosid View MSA
123741209 5271 Pentapetalae View MSA
122787118 5272 Eudicot View MSA
122046905 5273 Angiosperm View MSA
121345017 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.454     High  
cufflinks 4.215        
cufflinks 38.876     High  
cufflinks 4.214        
cufflinks 39.883     High  
cufflinks 3.484       Low

0 Strain