Gene : AT1G02020 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23026 - NADPH NITROREDUCTASE Genomic Order:  106
Name:  ? AT1G02020 Secondary Identifier:  ? PAC:19656856
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02020 0.5kb upstream 0.5kb upstream 2833 true Chr1: 352637-355469 Arabidopsis thaliana
AT1G02020 0.5kb upstream 0.5kb upstream 500 false Chr1: 354970-355469 Arabidopsis thaliana
AT1G02020 0.5kb downstream 0.5kb downstream 2833 true Chr1: 352137-354969 Arabidopsis thaliana
AT1G02020 0.5kb downstream 0.5kb downstream 500 false Chr1: 352137-352636 Arabidopsis thaliana
AT1G02020 1.0kb upstream 1.0kb upstream 3333 true Chr1: 352637-355969 Arabidopsis thaliana
AT1G02020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 354970-355969 Arabidopsis thaliana
AT1G02020 1.0kb downstream 1.0kb downstream 3333 true Chr1: 351637-354969 Arabidopsis thaliana
AT1G02020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 351637-352636 Arabidopsis thaliana
AT1G02020 2.0kb upstream 2.0kb upstream 4333 true Chr1: 352637-356969 Arabidopsis thaliana
AT1G02020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 354970-356969 Arabidopsis thaliana
AT1G02020 2.0kb downstream 2.0kb downstream 4333 true Chr1: 350637-354969 Arabidopsis thaliana
AT1G02020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 350637-352636 Arabidopsis thaliana
AT1G02020 5.0kb upstream 5.0kb upstream 7333 true Chr1: 352637-359969 Arabidopsis thaliana
AT1G02020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 354970-359969 Arabidopsis thaliana
AT1G02020 5.0kb downstream 5.0kb downstream 7333 true Chr1: 347637-354969 Arabidopsis thaliana
AT1G02020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 347637-352636 Arabidopsis thaliana
AT1G02020 10.0kb upstream 10.0kb upstream 12333 true Chr1: 352637-364969 Arabidopsis thaliana
AT1G02020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 354970-364969 Arabidopsis thaliana
AT1G02020 10.0kb downstream 10.0kb downstream 12333 true Chr1: 342637-354969 Arabidopsis thaliana
AT1G02020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 342637-352636 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378379 5261 Brassicaceae View MSA
123836780 5264 Brassicales-Malvales View MSA
124337435 5266 SBM View MSA
124244789 5268 Malvidae View MSA
124060909 5270 Rosid View MSA
123740231 5271 Pentapetalae View MSA
122793235 5272 Eudicot View MSA
122045526 5273 Angiosperm View MSA
121345856 5274 Embryophyte View MSA
123380279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.271        
cufflinks 1.856       Low
cufflinks 3.326        
cufflinks 2.106        
cufflinks 3.711       High
cufflinks 1.859       Low

0 Strain