Gene : AT1G01310 A. thaliana TAIR10
Defline:  (1 of 7) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  34
Name:  ? AT1G01310 Secondary Identifier:  ? PAC:19649801
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01310 0.5kb upstream 0.5kb upstream 1477 true Chr1: 119654-121130 Arabidopsis thaliana
AT1G01310 0.5kb upstream 0.5kb upstream 500 false Chr1: 119654-120153 Arabidopsis thaliana
AT1G01310 0.5kb downstream 0.5kb downstream 1477 true Chr1: 120154-121630 Arabidopsis thaliana
AT1G01310 0.5kb downstream 0.5kb downstream 500 false Chr1: 121131-121630 Arabidopsis thaliana
AT1G01310 1.0kb upstream 1.0kb upstream 1977 true Chr1: 119154-121130 Arabidopsis thaliana
AT1G01310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 119154-120153 Arabidopsis thaliana
AT1G01310 1.0kb downstream 1.0kb downstream 1977 true Chr1: 120154-122130 Arabidopsis thaliana
AT1G01310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 121131-122130 Arabidopsis thaliana
AT1G01310 2.0kb upstream 2.0kb upstream 2977 true Chr1: 118154-121130 Arabidopsis thaliana
AT1G01310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 118154-120153 Arabidopsis thaliana
AT1G01310 2.0kb downstream 2.0kb downstream 2977 true Chr1: 120154-123130 Arabidopsis thaliana
AT1G01310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 121131-123130 Arabidopsis thaliana
AT1G01310 5.0kb upstream 5.0kb upstream 5977 true Chr1: 115154-121130 Arabidopsis thaliana
AT1G01310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 115154-120153 Arabidopsis thaliana
AT1G01310 5.0kb downstream 5.0kb downstream 5977 true Chr1: 120154-126130 Arabidopsis thaliana
AT1G01310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 121131-126130 Arabidopsis thaliana
AT1G01310 10.0kb upstream 10.0kb upstream 10977 true Chr1: 110154-121130 Arabidopsis thaliana
AT1G01310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 110154-120153 Arabidopsis thaliana
AT1G01310 10.0kb downstream 10.0kb downstream 10977 true Chr1: 120154-131130 Arabidopsis thaliana
AT1G01310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 121131-131130 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370752 5261 Brassicaceae View MSA
123841077 5264 Brassicales-Malvales View MSA
124322836 5266 SBM View MSA
124245039 5268 Malvidae View MSA
124071232 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 0.078     Low  
cufflinks 0.034     Low  
cufflinks 0.016     Low Low
cufflinks 0.033     Low  
cufflinks 0.125     Low High

0 Strain