Gene : AT1G01260 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11514//PTHR11514:SF47 - MYC // TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED Genomic Order:  29
Name:  ? AT1G01260 Secondary Identifier:  ? PAC:19651078
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01260 0.5kb upstream 0.5kb upstream 3164 true Chr1: 108446-111609 Arabidopsis thaliana
AT1G01260 0.5kb upstream 0.5kb upstream 500 false Chr1: 108446-108945 Arabidopsis thaliana
AT1G01260 0.5kb downstream 0.5kb downstream 3164 true Chr1: 108946-112109 Arabidopsis thaliana
AT1G01260 0.5kb downstream 0.5kb downstream 500 false Chr1: 111610-112109 Arabidopsis thaliana
AT1G01260 1.0kb upstream 1.0kb upstream 3664 true Chr1: 107946-111609 Arabidopsis thaliana
AT1G01260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 107946-108945 Arabidopsis thaliana
AT1G01260 1.0kb downstream 1.0kb downstream 3664 true Chr1: 108946-112609 Arabidopsis thaliana
AT1G01260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 111610-112609 Arabidopsis thaliana
AT1G01260 2.0kb upstream 2.0kb upstream 4664 true Chr1: 106946-111609 Arabidopsis thaliana
AT1G01260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 106946-108945 Arabidopsis thaliana
AT1G01260 2.0kb downstream 2.0kb downstream 4664 true Chr1: 108946-113609 Arabidopsis thaliana
AT1G01260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 111610-113609 Arabidopsis thaliana
AT1G01260 5.0kb upstream 5.0kb upstream 7664 true Chr1: 103946-111609 Arabidopsis thaliana
AT1G01260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 103946-108945 Arabidopsis thaliana
AT1G01260 5.0kb downstream 5.0kb downstream 7664 true Chr1: 108946-116609 Arabidopsis thaliana
AT1G01260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 111610-116609 Arabidopsis thaliana
AT1G01260 10.0kb upstream 10.0kb upstream 12664 true Chr1: 98946-111609 Arabidopsis thaliana
AT1G01260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 98946-108945 Arabidopsis thaliana
AT1G01260 10.0kb downstream 10.0kb downstream 12664 true Chr1: 108946-121609 Arabidopsis thaliana
AT1G01260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 111610-121609 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362138 5261 Brassicaceae View MSA
123841251 5264 Brassicales-Malvales View MSA
124346242 5266 SBM View MSA
124237618 5268 Malvidae View MSA
124067031 5270 Rosid View MSA
123743665 5271 Pentapetalae View MSA
122788988 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.155        
cufflinks 4.499        
cufflinks 3.265        
cufflinks 4.79        
cufflinks 3.086       Low
cufflinks 4.841       High

0 Strain