Gene : AT1G01230 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12665 - ORMDL PROTEINS Genomic Order:  26
Name:  ? AT1G01230 Secondary Identifier:  ? PAC:19650274
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01230 0.5kb upstream 0.5kb upstream 2285 true Chr1: 96956-99240 Arabidopsis thaliana
AT1G01230 0.5kb upstream 0.5kb upstream 500 false Chr1: 96956-97455 Arabidopsis thaliana
AT1G01230 0.5kb downstream 0.5kb downstream 2285 true Chr1: 97456-99740 Arabidopsis thaliana
AT1G01230 0.5kb downstream 0.5kb downstream 500 false Chr1: 99241-99740 Arabidopsis thaliana
AT1G01230 1.0kb upstream 1.0kb upstream 2785 true Chr1: 96456-99240 Arabidopsis thaliana
AT1G01230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 96456-97455 Arabidopsis thaliana
AT1G01230 1.0kb downstream 1.0kb downstream 2785 true Chr1: 97456-100240 Arabidopsis thaliana
AT1G01230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 99241-100240 Arabidopsis thaliana
AT1G01230 2.0kb upstream 2.0kb upstream 3785 true Chr1: 95456-99240 Arabidopsis thaliana
AT1G01230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 95456-97455 Arabidopsis thaliana
AT1G01230 2.0kb downstream 2.0kb downstream 3785 true Chr1: 97456-101240 Arabidopsis thaliana
AT1G01230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 99241-101240 Arabidopsis thaliana
AT1G01230 5.0kb upstream 5.0kb upstream 6785 true Chr1: 92456-99240 Arabidopsis thaliana
AT1G01230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 92456-97455 Arabidopsis thaliana
AT1G01230 5.0kb downstream 5.0kb downstream 6785 true Chr1: 97456-104240 Arabidopsis thaliana
AT1G01230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 99241-104240 Arabidopsis thaliana
AT1G01230 10.0kb upstream 10.0kb upstream 11785 true Chr1: 87456-99240 Arabidopsis thaliana
AT1G01230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 87456-97455 Arabidopsis thaliana
AT1G01230 10.0kb downstream 10.0kb downstream 11785 true Chr1: 97456-109240 Arabidopsis thaliana
AT1G01230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 99241-109240 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374753 5261 Brassicaceae View MSA
123835395 5264 Brassicales-Malvales View MSA
124340574 5266 SBM View MSA
124241422 5268 Malvidae View MSA
124066727 5270 Rosid View MSA
123748092 5271 Pentapetalae View MSA
122788423 5272 Eudicot View MSA
122043141 5273 Angiosperm View MSA
121345278 5274 Embryophyte View MSA
123424316 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.095        
cufflinks 19.211       High
cufflinks 15.224        
cufflinks 17.457        
cufflinks 14.739       Low
cufflinks 18.465        

0 Strain