Gene : NGA3 A. thaliana TAIR10
Primary Identifier:  ? AT1G01030 Defline:  (1 of 3) PTHR31140//PTHR31140:SF4 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED
Genomic Order:  3 Name:  ? AT1G01030
Secondary Identifier:  ? PAC:19649747
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01030 0.5kb upstream 0.5kb upstream 2566 true Chr1: 11649-14214 Arabidopsis thaliana
AT1G01030 0.5kb upstream 0.5kb upstream 500 false Chr1: 13715-14214 Arabidopsis thaliana
AT1G01030 0.5kb downstream 0.5kb downstream 2566 true Chr1: 11149-13714 Arabidopsis thaliana
AT1G01030 0.5kb downstream 0.5kb downstream 500 false Chr1: 11149-11648 Arabidopsis thaliana
AT1G01030 1.0kb upstream 1.0kb upstream 3066 true Chr1: 11649-14714 Arabidopsis thaliana
AT1G01030 1.0kb upstream 1.0kb upstream 1000 false Chr1: 13715-14714 Arabidopsis thaliana
AT1G01030 1.0kb downstream 1.0kb downstream 3066 true Chr1: 10649-13714 Arabidopsis thaliana
AT1G01030 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10649-11648 Arabidopsis thaliana
AT1G01030 2.0kb upstream 2.0kb upstream 4066 true Chr1: 11649-15714 Arabidopsis thaliana
AT1G01030 2.0kb upstream 2.0kb upstream 2000 false Chr1: 13715-15714 Arabidopsis thaliana
AT1G01030 2.0kb downstream 2.0kb downstream 4066 true Chr1: 9649-13714 Arabidopsis thaliana
AT1G01030 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9649-11648 Arabidopsis thaliana
AT1G01030 5.0kb upstream 5.0kb upstream 7066 true Chr1: 11649-18714 Arabidopsis thaliana
AT1G01030 5.0kb upstream 5.0kb upstream 5000 false Chr1: 13715-18714 Arabidopsis thaliana
AT1G01030 5.0kb downstream 5.0kb downstream 7066 true Chr1: 6649-13714 Arabidopsis thaliana
AT1G01030 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6649-11648 Arabidopsis thaliana
AT1G01030 10.0kb upstream 10.0kb upstream 12066 true Chr1: 11649-23714 Arabidopsis thaliana
AT1G01030 10.0kb upstream 10.0kb upstream 10000 false Chr1: 13715-23714 Arabidopsis thaliana
AT1G01030 10.0kb downstream 10.0kb downstream 12066 true Chr1: 1649-13714 Arabidopsis thaliana
AT1G01030 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1649-11648 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370735 5261 Brassicaceae View MSA
123837410 5264 Brassicales-Malvales View MSA
124350382 5266 SBM View MSA
124246333 5268 Malvidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.375       Low
cufflinks 1.54        
cufflinks 0.981        
cufflinks 2.179       High
cufflinks 0.724        
cufflinks 1.406        

0 Strain