Gene : AT1G10820 A. thaliana TAIR10
Defline:  (1 of 4) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  1054
Name:  ? AT1G10820 Secondary Identifier:  ? PAC:19650108
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10820 0.5kb upstream 0.5kb upstream 4667 true Chr1: 3600910-3605576 Arabidopsis thaliana
AT1G10820 0.5kb upstream 0.5kb upstream 500 false Chr1: 3605077-3605576 Arabidopsis thaliana
AT1G10820 0.5kb downstream 0.5kb downstream 4667 true Chr1: 3600410-3605076 Arabidopsis thaliana
AT1G10820 0.5kb downstream 0.5kb downstream 500 false Chr1: 3600410-3600909 Arabidopsis thaliana
AT1G10820 1.0kb upstream 1.0kb upstream 5167 true Chr1: 3600910-3606076 Arabidopsis thaliana
AT1G10820 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3605077-3606076 Arabidopsis thaliana
AT1G10820 1.0kb downstream 1.0kb downstream 5167 true Chr1: 3599910-3605076 Arabidopsis thaliana
AT1G10820 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3599910-3600909 Arabidopsis thaliana
AT1G10820 2.0kb upstream 2.0kb upstream 6167 true Chr1: 3600910-3607076 Arabidopsis thaliana
AT1G10820 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3605077-3607076 Arabidopsis thaliana
AT1G10820 2.0kb downstream 2.0kb downstream 6167 true Chr1: 3598910-3605076 Arabidopsis thaliana
AT1G10820 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3598910-3600909 Arabidopsis thaliana
AT1G10820 5.0kb upstream 5.0kb upstream 9167 true Chr1: 3600910-3610076 Arabidopsis thaliana
AT1G10820 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3605077-3610076 Arabidopsis thaliana
AT1G10820 5.0kb downstream 5.0kb downstream 9167 true Chr1: 3595910-3605076 Arabidopsis thaliana
AT1G10820 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3595910-3600909 Arabidopsis thaliana
AT1G10820 10.0kb upstream 10.0kb upstream 14167 true Chr1: 3600910-3615076 Arabidopsis thaliana
AT1G10820 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3605077-3615076 Arabidopsis thaliana
AT1G10820 10.0kb downstream 10.0kb downstream 14167 true Chr1: 3590910-3605076 Arabidopsis thaliana
AT1G10820 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3590910-3600909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378041 5261 Brassicaceae View MSA
123801720 5264 Brassicales-Malvales View MSA
124350610 5266 SBM View MSA
124243858 5268 Malvidae View MSA
124060862 5270 Rosid View MSA
123751212 5271 Pentapetalae View MSA
122789009 5272 Eudicot View MSA
122047918 5273 Angiosperm View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33        
cufflinks 5.488       High
cufflinks 2.248        
cufflinks 5.043        
cufflinks 2.173        
cufflinks 4.118        

0 Strain