Gene : CRT3 A. thaliana TAIR10
Primary Identifier:  ? AT1G08450 Defline:  (1 of 1) PTHR11073//PTHR11073:SF6 - CALRETICULIN AND CALNEXIN // CALRETICULIN-3
Genomic Order:  794 Name:  ? AT1G08450
Secondary Identifier:  ? PAC:19654732
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08450 0.5kb upstream 0.5kb upstream 4595 true Chr1: 2667798-2672392 Arabidopsis thaliana
AT1G08450 0.5kb upstream 0.5kb upstream 500 false Chr1: 2671893-2672392 Arabidopsis thaliana
AT1G08450 0.5kb downstream 0.5kb downstream 4595 true Chr1: 2667298-2671892 Arabidopsis thaliana
AT1G08450 0.5kb downstream 0.5kb downstream 500 false Chr1: 2667298-2667797 Arabidopsis thaliana
AT1G08450 1.0kb upstream 1.0kb upstream 5095 true Chr1: 2667798-2672892 Arabidopsis thaliana
AT1G08450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2671893-2672892 Arabidopsis thaliana
AT1G08450 1.0kb downstream 1.0kb downstream 5095 true Chr1: 2666798-2671892 Arabidopsis thaliana
AT1G08450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2666798-2667797 Arabidopsis thaliana
AT1G08450 2.0kb upstream 2.0kb upstream 6095 true Chr1: 2667798-2673892 Arabidopsis thaliana
AT1G08450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2671893-2673892 Arabidopsis thaliana
AT1G08450 2.0kb downstream 2.0kb downstream 6095 true Chr1: 2665798-2671892 Arabidopsis thaliana
AT1G08450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2665798-2667797 Arabidopsis thaliana
AT1G08450 5.0kb upstream 5.0kb upstream 9095 true Chr1: 2667798-2676892 Arabidopsis thaliana
AT1G08450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2671893-2676892 Arabidopsis thaliana
AT1G08450 5.0kb downstream 5.0kb downstream 9095 true Chr1: 2662798-2671892 Arabidopsis thaliana
AT1G08450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2662798-2667797 Arabidopsis thaliana
AT1G08450 10.0kb upstream 10.0kb upstream 14095 true Chr1: 2667798-2681892 Arabidopsis thaliana
AT1G08450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2671893-2681892 Arabidopsis thaliana
AT1G08450 10.0kb downstream 10.0kb downstream 14095 true Chr1: 2657798-2671892 Arabidopsis thaliana
AT1G08450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2657798-2667797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378514 5261 Brassicaceae View MSA
123834511 5264 Brassicales-Malvales View MSA
124336734 5266 SBM View MSA
124248219 5268 Malvidae View MSA
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.373     High High
cufflinks 4.339        
cufflinks 7.307        
cufflinks 4.396        
cufflinks 12.12        
cufflinks 4.429        

0 Strain