Gene : AT1G72250 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24115:SF339 - DI-GLUCOSE BINDING PROTEIN WITH KINESIN MOTOR DOMAIN Genomic Order:  6184
Name:  ? AT1G72250 Secondary Identifier:  ? PAC:19654747
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72250 0.5kb upstream 0.5kb upstream 5970 true Chr1: 27192345-27198314 Arabidopsis thaliana
AT1G72250 0.5kb upstream 0.5kb upstream 500 false Chr1: 27192345-27192844 Arabidopsis thaliana
AT1G72250 0.5kb downstream 0.5kb downstream 5970 true Chr1: 27192845-27198814 Arabidopsis thaliana
AT1G72250 0.5kb downstream 0.5kb downstream 500 false Chr1: 27198315-27198814 Arabidopsis thaliana
AT1G72250 1.0kb upstream 1.0kb upstream 6470 true Chr1: 27191845-27198314 Arabidopsis thaliana
AT1G72250 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27191845-27192844 Arabidopsis thaliana
AT1G72250 1.0kb downstream 1.0kb downstream 6470 true Chr1: 27192845-27199314 Arabidopsis thaliana
AT1G72250 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27198315-27199314 Arabidopsis thaliana
AT1G72250 2.0kb upstream 2.0kb upstream 7470 true Chr1: 27190845-27198314 Arabidopsis thaliana
AT1G72250 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27190845-27192844 Arabidopsis thaliana
AT1G72250 2.0kb downstream 2.0kb downstream 7470 true Chr1: 27192845-27200314 Arabidopsis thaliana
AT1G72250 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27198315-27200314 Arabidopsis thaliana
AT1G72250 5.0kb upstream 5.0kb upstream 10470 true Chr1: 27187845-27198314 Arabidopsis thaliana
AT1G72250 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27187845-27192844 Arabidopsis thaliana
AT1G72250 5.0kb downstream 5.0kb downstream 10470 true Chr1: 27192845-27203314 Arabidopsis thaliana
AT1G72250 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27198315-27203314 Arabidopsis thaliana
AT1G72250 10.0kb upstream 10.0kb upstream 15470 true Chr1: 27182845-27198314 Arabidopsis thaliana
AT1G72250 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27182845-27192844 Arabidopsis thaliana
AT1G72250 10.0kb downstream 10.0kb downstream 15470 true Chr1: 27192845-27208314 Arabidopsis thaliana
AT1G72250 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27198315-27208314 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041439 5273 Angiosperm View MSA
122377717 5261 Brassicaceae View MSA
123835954 5264 Brassicales-Malvales View MSA
124351087 5266 SBM View MSA
124243711 5268 Malvidae View MSA
124062464 5270 Rosid View MSA
123748545 5271 Pentapetalae View MSA
122794384 5272 Eudicot View MSA
123429039 5275 Viridiplantae View MSA
121349532 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.022        
cufflinks 3.954        
cufflinks 0.544        
cufflinks 3.239        
cufflinks 0.443       Low
cufflinks 6.061       High

0 Strain