Gene : AT1G71360 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12953//PTHR12953:SF1 - MEMBRANE PROTEIN CH1 RELATED // GALACTOSE-BINDING PROTEIN Genomic Order:  6101
Name:  ? AT1G71360 Secondary Identifier:  ? PAC:19655027
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71360 0.5kb upstream 0.5kb upstream 3203 true Chr1: 26892100-26895302 Arabidopsis thaliana
AT1G71360 0.5kb upstream 0.5kb upstream 500 false Chr1: 26894803-26895302 Arabidopsis thaliana
AT1G71360 0.5kb downstream 0.5kb downstream 3203 true Chr1: 26891600-26894802 Arabidopsis thaliana
AT1G71360 0.5kb downstream 0.5kb downstream 500 false Chr1: 26891600-26892099 Arabidopsis thaliana
AT1G71360 1.0kb upstream 1.0kb upstream 3703 true Chr1: 26892100-26895802 Arabidopsis thaliana
AT1G71360 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26894803-26895802 Arabidopsis thaliana
AT1G71360 1.0kb downstream 1.0kb downstream 3703 true Chr1: 26891100-26894802 Arabidopsis thaliana
AT1G71360 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26891100-26892099 Arabidopsis thaliana
AT1G71360 2.0kb upstream 2.0kb upstream 4703 true Chr1: 26892100-26896802 Arabidopsis thaliana
AT1G71360 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26894803-26896802 Arabidopsis thaliana
AT1G71360 2.0kb downstream 2.0kb downstream 4703 true Chr1: 26890100-26894802 Arabidopsis thaliana
AT1G71360 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26890100-26892099 Arabidopsis thaliana
AT1G71360 5.0kb upstream 5.0kb upstream 7703 true Chr1: 26892100-26899802 Arabidopsis thaliana
AT1G71360 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26894803-26899802 Arabidopsis thaliana
AT1G71360 5.0kb downstream 5.0kb downstream 7703 true Chr1: 26887100-26894802 Arabidopsis thaliana
AT1G71360 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26887100-26892099 Arabidopsis thaliana
AT1G71360 10.0kb upstream 10.0kb upstream 12703 true Chr1: 26892100-26904802 Arabidopsis thaliana
AT1G71360 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26894803-26904802 Arabidopsis thaliana
AT1G71360 10.0kb downstream 10.0kb downstream 12703 true Chr1: 26882100-26894802 Arabidopsis thaliana
AT1G71360 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26882100-26892099 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360324 5261 Brassicaceae View MSA
123836519 5264 Brassicales-Malvales View MSA
124339256 5266 SBM View MSA
124236857 5268 Malvidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.406        
cufflinks 17.406        
cufflinks 5.39        
cufflinks 13.036        
cufflinks 4.931        
cufflinks 19.83       High

0 Strain