Gene : CPNIFS A. thaliana TAIR10
Primary Identifier:  ? AT1G08490 Defline:  (1 of 1) 2.8.1.7//4.4.1.16 - Cysteine desulfurase / Cysteine desulfurylase // Selenocysteine lyase / Selenocysteine reductase
Genomic Order:  799 Name:  ? AT1G08490
Secondary Identifier:  ? PAC:19657665
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1021 Arabidopsis thaliana pathologic  
Athaliana PWY-6823 Arabidopsis thaliana pathologic  
Athaliana PWY-7250 Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08490 0.5kb upstream 0.5kb upstream 3437 true Chr1: 2685659-2689095 Arabidopsis thaliana
AT1G08490 0.5kb upstream 0.5kb upstream 500 false Chr1: 2688596-2689095 Arabidopsis thaliana
AT1G08490 0.5kb downstream 0.5kb downstream 3437 true Chr1: 2685159-2688595 Arabidopsis thaliana
AT1G08490 0.5kb downstream 0.5kb downstream 500 false Chr1: 2685159-2685658 Arabidopsis thaliana
AT1G08490 1.0kb upstream 1.0kb upstream 3937 true Chr1: 2685659-2689595 Arabidopsis thaliana
AT1G08490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2688596-2689595 Arabidopsis thaliana
AT1G08490 1.0kb downstream 1.0kb downstream 3937 true Chr1: 2684659-2688595 Arabidopsis thaliana
AT1G08490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2684659-2685658 Arabidopsis thaliana
AT1G08490 2.0kb upstream 2.0kb upstream 4937 true Chr1: 2685659-2690595 Arabidopsis thaliana
AT1G08490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2688596-2690595 Arabidopsis thaliana
AT1G08490 2.0kb downstream 2.0kb downstream 4937 true Chr1: 2683659-2688595 Arabidopsis thaliana
AT1G08490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2683659-2685658 Arabidopsis thaliana
AT1G08490 5.0kb upstream 5.0kb upstream 7937 true Chr1: 2685659-2693595 Arabidopsis thaliana
AT1G08490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2688596-2693595 Arabidopsis thaliana
AT1G08490 5.0kb downstream 5.0kb downstream 7937 true Chr1: 2680659-2688595 Arabidopsis thaliana
AT1G08490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2680659-2685658 Arabidopsis thaliana
AT1G08490 10.0kb upstream 10.0kb upstream 12937 true Chr1: 2685659-2698595 Arabidopsis thaliana
AT1G08490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2688596-2698595 Arabidopsis thaliana
AT1G08490 10.0kb downstream 10.0kb downstream 12937 true Chr1: 2675659-2688595 Arabidopsis thaliana
AT1G08490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2675659-2685658 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372199 5261 Brassicaceae View MSA
123832892 5264 Brassicales-Malvales View MSA
124346335 5266 SBM View MSA
124238187 5268 Malvidae View MSA
124062122 5270 Rosid View MSA
123738873 5271 Pentapetalae View MSA
122791237 5272 Eudicot View MSA
122045699 5273 Angiosperm View MSA
121346585 5274 Embryophyte View MSA
123424860 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.665       High
cufflinks 7.247        
cufflinks 17.181        
cufflinks 7.398        
cufflinks 15.699        
cufflinks 7.583        

0 Strain