Gene : AT1G08270 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 Genomic Order:  776
Name:  ? AT1G08270 Secondary Identifier:  ? PAC:19654547
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08270 0.5kb upstream 0.5kb upstream 1739 true Chr1: 2606269-2608007 Arabidopsis thaliana
AT1G08270 0.5kb upstream 0.5kb upstream 500 false Chr1: 2607508-2608007 Arabidopsis thaliana
AT1G08270 0.5kb downstream 0.5kb downstream 1739 true Chr1: 2605769-2607507 Arabidopsis thaliana
AT1G08270 0.5kb downstream 0.5kb downstream 500 false Chr1: 2605769-2606268 Arabidopsis thaliana
AT1G08270 1.0kb upstream 1.0kb upstream 2239 true Chr1: 2606269-2608507 Arabidopsis thaliana
AT1G08270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2607508-2608507 Arabidopsis thaliana
AT1G08270 1.0kb downstream 1.0kb downstream 2239 true Chr1: 2605269-2607507 Arabidopsis thaliana
AT1G08270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2605269-2606268 Arabidopsis thaliana
AT1G08270 2.0kb upstream 2.0kb upstream 3239 true Chr1: 2606269-2609507 Arabidopsis thaliana
AT1G08270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2607508-2609507 Arabidopsis thaliana
AT1G08270 2.0kb downstream 2.0kb downstream 3239 true Chr1: 2604269-2607507 Arabidopsis thaliana
AT1G08270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2604269-2606268 Arabidopsis thaliana
AT1G08270 5.0kb upstream 5.0kb upstream 6239 true Chr1: 2606269-2612507 Arabidopsis thaliana
AT1G08270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2607508-2612507 Arabidopsis thaliana
AT1G08270 5.0kb downstream 5.0kb downstream 6239 true Chr1: 2601269-2607507 Arabidopsis thaliana
AT1G08270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2601269-2606268 Arabidopsis thaliana
AT1G08270 10.0kb upstream 10.0kb upstream 11239 true Chr1: 2606269-2617507 Arabidopsis thaliana
AT1G08270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2607508-2617507 Arabidopsis thaliana
AT1G08270 10.0kb downstream 10.0kb downstream 11239 true Chr1: 2596269-2607507 Arabidopsis thaliana
AT1G08270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2596269-2606268 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780141 5273 Angiosperm View MSA
122328770 5261 Brassicaceae Singleton cluster - no MSA
123770107 5264 Brassicales-Malvales Singleton cluster - no MSA
124268655 5266 SBM Singleton cluster - no MSA
124124845 5268 Malvidae Singleton cluster - no MSA
123853844 5270 Rosid Singleton cluster - no MSA
123745251 5271 Pentapetalae View MSA
122771424 5272 Eudicot View MSA
121051767 5274 Embryophyte View MSA
123091842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526        
cufflinks 1.275       High
cufflinks 0.384       Low
cufflinks 0.983        
cufflinks 0.468        
cufflinks 0.854        

0 Strain