Gene : AT1G08350 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10766//PTHR10766:SF60 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SYNTAXIN OF PLANT 111 Genomic Order:  784
Name:  ? AT1G08350 Secondary Identifier:  ? PAC:19655122
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08350 0.5kb upstream 0.5kb upstream 3543 true Chr1: 2632810-2636352 Arabidopsis thaliana
AT1G08350 0.5kb upstream 0.5kb upstream 500 false Chr1: 2635853-2636352 Arabidopsis thaliana
AT1G08350 0.5kb downstream 0.5kb downstream 3543 true Chr1: 2632310-2635852 Arabidopsis thaliana
AT1G08350 0.5kb downstream 0.5kb downstream 500 false Chr1: 2632310-2632809 Arabidopsis thaliana
AT1G08350 1.0kb upstream 1.0kb upstream 4043 true Chr1: 2632810-2636852 Arabidopsis thaliana
AT1G08350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2635853-2636852 Arabidopsis thaliana
AT1G08350 1.0kb downstream 1.0kb downstream 4043 true Chr1: 2631810-2635852 Arabidopsis thaliana
AT1G08350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2631810-2632809 Arabidopsis thaliana
AT1G08350 2.0kb upstream 2.0kb upstream 5043 true Chr1: 2632810-2637852 Arabidopsis thaliana
AT1G08350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2635853-2637852 Arabidopsis thaliana
AT1G08350 2.0kb downstream 2.0kb downstream 5043 true Chr1: 2630810-2635852 Arabidopsis thaliana
AT1G08350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2630810-2632809 Arabidopsis thaliana
AT1G08350 5.0kb upstream 5.0kb upstream 8043 true Chr1: 2632810-2640852 Arabidopsis thaliana
AT1G08350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2635853-2640852 Arabidopsis thaliana
AT1G08350 5.0kb downstream 5.0kb downstream 8043 true Chr1: 2627810-2635852 Arabidopsis thaliana
AT1G08350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2627810-2632809 Arabidopsis thaliana
AT1G08350 10.0kb upstream 10.0kb upstream 13043 true Chr1: 2632810-2645852 Arabidopsis thaliana
AT1G08350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2635853-2645852 Arabidopsis thaliana
AT1G08350 10.0kb downstream 10.0kb downstream 13043 true Chr1: 2622810-2635852 Arabidopsis thaliana
AT1G08350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2622810-2632809 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792052 5273 Angiosperm View MSA
122367258 5261 Brassicaceae View MSA
123834495 5264 Brassicales-Malvales View MSA
124338143 5266 SBM View MSA
124237892 5268 Malvidae View MSA
124067275 5270 Rosid View MSA
123741376 5271 Pentapetalae View MSA
122796121 5272 Eudicot View MSA
121063308 5274 Embryophyte View MSA
123103068 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.948        
cufflinks 2.693        
cufflinks 1.775        
cufflinks 3.016       High
cufflinks 1.533       Low
cufflinks 2.986        

0 Strain