Gene : AT1G08170 A. thaliana TAIR10
Defline:  (1 of 11) K11252 - histone H2B (H2B) Genomic Order:  767
Name:  ? AT1G08170 Secondary Identifier:  ? PAC:19656855
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08170 0.5kb upstream 0.5kb upstream 1232 true Chr1: 2562941-2564172 Arabidopsis thaliana
AT1G08170 0.5kb upstream 0.5kb upstream 500 false Chr1: 2563673-2564172 Arabidopsis thaliana
AT1G08170 0.5kb downstream 0.5kb downstream 1232 true Chr1: 2562441-2563672 Arabidopsis thaliana
AT1G08170 0.5kb downstream 0.5kb downstream 500 false Chr1: 2562441-2562940 Arabidopsis thaliana
AT1G08170 1.0kb upstream 1.0kb upstream 1732 true Chr1: 2562941-2564672 Arabidopsis thaliana
AT1G08170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2563673-2564672 Arabidopsis thaliana
AT1G08170 1.0kb downstream 1.0kb downstream 1732 true Chr1: 2561941-2563672 Arabidopsis thaliana
AT1G08170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2561941-2562940 Arabidopsis thaliana
AT1G08170 2.0kb upstream 2.0kb upstream 2732 true Chr1: 2562941-2565672 Arabidopsis thaliana
AT1G08170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2563673-2565672 Arabidopsis thaliana
AT1G08170 2.0kb downstream 2.0kb downstream 2732 true Chr1: 2560941-2563672 Arabidopsis thaliana
AT1G08170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2560941-2562940 Arabidopsis thaliana
AT1G08170 5.0kb upstream 5.0kb upstream 5732 true Chr1: 2562941-2568672 Arabidopsis thaliana
AT1G08170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2563673-2568672 Arabidopsis thaliana
AT1G08170 5.0kb downstream 5.0kb downstream 5732 true Chr1: 2557941-2563672 Arabidopsis thaliana
AT1G08170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2557941-2562940 Arabidopsis thaliana
AT1G08170 10.0kb upstream 10.0kb upstream 10732 true Chr1: 2562941-2573672 Arabidopsis thaliana
AT1G08170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2563673-2573672 Arabidopsis thaliana
AT1G08170 10.0kb downstream 10.0kb downstream 10732 true Chr1: 2552941-2563672 Arabidopsis thaliana
AT1G08170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2552941-2562940 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377286 5261 Brassicaceae View MSA
123835718 5264 Brassicales-Malvales View MSA
124342561 5266 SBM View MSA
124254402 5268 Malvidae View MSA
124073905 5270 Rosid View MSA
123752654 5271 Pentapetalae View MSA
122797852 5272 Eudicot View MSA
122049955 5273 Angiosperm View MSA
121350450 5274 Embryophyte View MSA
123426951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 0.084     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.128     Low  
cufflinks 0.14     Low  
cufflinks 0.063     Low  

0 Strain