Gene : ECA1 A. thaliana TAIR10
Primary Identifier:  ? AT1G07810 Defline:  (1 of 3) PTHR24093//PTHR24093:SF289 - FAMILY NOT NAMED // CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED
Genomic Order:  722 Name:  ? AT1G07810
Secondary Identifier:  ? PAC:19653532
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07810 0.5kb upstream 0.5kb upstream 4993 true Chr1: 2415765-2420757 Arabidopsis thaliana
AT1G07810 0.5kb upstream 0.5kb upstream 500 false Chr1: 2415765-2416264 Arabidopsis thaliana
AT1G07810 0.5kb downstream 0.5kb downstream 4993 true Chr1: 2416265-2421257 Arabidopsis thaliana
AT1G07810 0.5kb downstream 0.5kb downstream 500 false Chr1: 2420758-2421257 Arabidopsis thaliana
AT1G07810 1.0kb upstream 1.0kb upstream 5493 true Chr1: 2415265-2420757 Arabidopsis thaliana
AT1G07810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2415265-2416264 Arabidopsis thaliana
AT1G07810 1.0kb downstream 1.0kb downstream 5493 true Chr1: 2416265-2421757 Arabidopsis thaliana
AT1G07810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2420758-2421757 Arabidopsis thaliana
AT1G07810 2.0kb upstream 2.0kb upstream 6493 true Chr1: 2414265-2420757 Arabidopsis thaliana
AT1G07810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2414265-2416264 Arabidopsis thaliana
AT1G07810 2.0kb downstream 2.0kb downstream 6493 true Chr1: 2416265-2422757 Arabidopsis thaliana
AT1G07810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2420758-2422757 Arabidopsis thaliana
AT1G07810 5.0kb upstream 5.0kb upstream 9493 true Chr1: 2411265-2420757 Arabidopsis thaliana
AT1G07810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2411265-2416264 Arabidopsis thaliana
AT1G07810 5.0kb downstream 5.0kb downstream 9493 true Chr1: 2416265-2425757 Arabidopsis thaliana
AT1G07810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2420758-2425757 Arabidopsis thaliana
AT1G07810 10.0kb upstream 10.0kb upstream 14493 true Chr1: 2406265-2420757 Arabidopsis thaliana
AT1G07810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2406265-2416264 Arabidopsis thaliana
AT1G07810 10.0kb downstream 10.0kb downstream 14493 true Chr1: 2416265-2430757 Arabidopsis thaliana
AT1G07810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2420758-2430757 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331752 5261 Brassicaceae View MSA
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.081        
cufflinks 16.561        
cufflinks 10.492       Low
cufflinks 20.152       High
cufflinks 12.714        
cufflinks 17.293        

0 Strain