Gene : OBP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G07640 Defline:  (1 of 6) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED
Genomic Order:  701 Name:  ? AT1G07640
Secondary Identifier:  ? PAC:19655809
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07640 0.5kb upstream 0.5kb upstream 2374 true Chr1: 2354354-2356727 Arabidopsis thaliana
AT1G07640 0.5kb upstream 0.5kb upstream 500 false Chr1: 2356228-2356727 Arabidopsis thaliana
AT1G07640 0.5kb downstream 0.5kb downstream 2374 true Chr1: 2353854-2356227 Arabidopsis thaliana
AT1G07640 0.5kb downstream 0.5kb downstream 500 false Chr1: 2353854-2354353 Arabidopsis thaliana
AT1G07640 1.0kb upstream 1.0kb upstream 2874 true Chr1: 2354354-2357227 Arabidopsis thaliana
AT1G07640 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2356228-2357227 Arabidopsis thaliana
AT1G07640 1.0kb downstream 1.0kb downstream 2874 true Chr1: 2353354-2356227 Arabidopsis thaliana
AT1G07640 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2353354-2354353 Arabidopsis thaliana
AT1G07640 2.0kb upstream 2.0kb upstream 3874 true Chr1: 2354354-2358227 Arabidopsis thaliana
AT1G07640 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2356228-2358227 Arabidopsis thaliana
AT1G07640 2.0kb downstream 2.0kb downstream 3874 true Chr1: 2352354-2356227 Arabidopsis thaliana
AT1G07640 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2352354-2354353 Arabidopsis thaliana
AT1G07640 5.0kb upstream 5.0kb upstream 6874 true Chr1: 2354354-2361227 Arabidopsis thaliana
AT1G07640 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2356228-2361227 Arabidopsis thaliana
AT1G07640 5.0kb downstream 5.0kb downstream 6874 true Chr1: 2349354-2356227 Arabidopsis thaliana
AT1G07640 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2349354-2354353 Arabidopsis thaliana
AT1G07640 10.0kb upstream 10.0kb upstream 11874 true Chr1: 2354354-2366227 Arabidopsis thaliana
AT1G07640 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2356228-2366227 Arabidopsis thaliana
AT1G07640 10.0kb downstream 10.0kb downstream 11874 true Chr1: 2344354-2356227 Arabidopsis thaliana
AT1G07640 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2344354-2354353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370776 5261 Brassicaceae View MSA
123840699 5264 Brassicales-Malvales View MSA
124343375 5266 SBM View MSA
124248086 5268 Malvidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.731        
cufflinks 9.114        
cufflinks 6.359        
cufflinks 9.228       High
cufflinks 5.091       Low
cufflinks 7.361        

0 Strain