Gene : ECA4 A. thaliana TAIR10
Primary Identifier:  ? AT1G07670 Defline:  (1 of 3) PTHR24093//PTHR24093:SF289 - FAMILY NOT NAMED // CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED
Genomic Order:  705 Name:  ? AT1G07670
Secondary Identifier:  ? PAC:19655178
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07670 0.5kb upstream 0.5kb upstream 4994 true Chr1: 2370052-2375045 Arabidopsis thaliana
AT1G07670 0.5kb upstream 0.5kb upstream 500 false Chr1: 2374546-2375045 Arabidopsis thaliana
AT1G07670 0.5kb downstream 0.5kb downstream 4994 true Chr1: 2369552-2374545 Arabidopsis thaliana
AT1G07670 0.5kb downstream 0.5kb downstream 500 false Chr1: 2369552-2370051 Arabidopsis thaliana
AT1G07670 1.0kb upstream 1.0kb upstream 5494 true Chr1: 2370052-2375545 Arabidopsis thaliana
AT1G07670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2374546-2375545 Arabidopsis thaliana
AT1G07670 1.0kb downstream 1.0kb downstream 5494 true Chr1: 2369052-2374545 Arabidopsis thaliana
AT1G07670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2369052-2370051 Arabidopsis thaliana
AT1G07670 2.0kb upstream 2.0kb upstream 6494 true Chr1: 2370052-2376545 Arabidopsis thaliana
AT1G07670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2374546-2376545 Arabidopsis thaliana
AT1G07670 2.0kb downstream 2.0kb downstream 6494 true Chr1: 2368052-2374545 Arabidopsis thaliana
AT1G07670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2368052-2370051 Arabidopsis thaliana
AT1G07670 5.0kb upstream 5.0kb upstream 9494 true Chr1: 2370052-2379545 Arabidopsis thaliana
AT1G07670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2374546-2379545 Arabidopsis thaliana
AT1G07670 5.0kb downstream 5.0kb downstream 9494 true Chr1: 2365052-2374545 Arabidopsis thaliana
AT1G07670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2365052-2370051 Arabidopsis thaliana
AT1G07670 10.0kb upstream 10.0kb upstream 14494 true Chr1: 2370052-2384545 Arabidopsis thaliana
AT1G07670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2374546-2384545 Arabidopsis thaliana
AT1G07670 10.0kb downstream 10.0kb downstream 14494 true Chr1: 2360052-2374545 Arabidopsis thaliana
AT1G07670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2360052-2370051 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370910 5261 Brassicaceae View MSA
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.254        
cufflinks 29.301     High  
cufflinks 11.092       Low
cufflinks 33.12     High  
cufflinks 12.783        
cufflinks 36.22     High High

0 Strain