Gene : ATOBGM A. thaliana TAIR10
Primary Identifier:  ? AT1G07620 Defline:  (1 of 2) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // SUBFAMILY NOT NAMED
Genomic Order:  699 Name:  ? AT1G07620
Secondary Identifier:  ? PAC:19652543
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07620 0.5kb upstream 0.5kb upstream 2953 true Chr1: 2344390-2347342 Arabidopsis thaliana
AT1G07620 0.5kb upstream 0.5kb upstream 500 false Chr1: 2346843-2347342 Arabidopsis thaliana
AT1G07620 0.5kb downstream 0.5kb downstream 2953 true Chr1: 2343890-2346842 Arabidopsis thaliana
AT1G07620 0.5kb downstream 0.5kb downstream 500 false Chr1: 2343890-2344389 Arabidopsis thaliana
AT1G07620 1.0kb upstream 1.0kb upstream 3453 true Chr1: 2344390-2347842 Arabidopsis thaliana
AT1G07620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2346843-2347842 Arabidopsis thaliana
AT1G07620 1.0kb downstream 1.0kb downstream 3453 true Chr1: 2343390-2346842 Arabidopsis thaliana
AT1G07620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2343390-2344389 Arabidopsis thaliana
AT1G07620 2.0kb upstream 2.0kb upstream 4453 true Chr1: 2344390-2348842 Arabidopsis thaliana
AT1G07620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2346843-2348842 Arabidopsis thaliana
AT1G07620 2.0kb downstream 2.0kb downstream 4453 true Chr1: 2342390-2346842 Arabidopsis thaliana
AT1G07620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2342390-2344389 Arabidopsis thaliana
AT1G07620 5.0kb upstream 5.0kb upstream 7453 true Chr1: 2344390-2351842 Arabidopsis thaliana
AT1G07620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2346843-2351842 Arabidopsis thaliana
AT1G07620 5.0kb downstream 5.0kb downstream 7453 true Chr1: 2339390-2346842 Arabidopsis thaliana
AT1G07620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2339390-2344389 Arabidopsis thaliana
AT1G07620 10.0kb upstream 10.0kb upstream 12453 true Chr1: 2344390-2356842 Arabidopsis thaliana
AT1G07620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2346843-2356842 Arabidopsis thaliana
AT1G07620 10.0kb downstream 10.0kb downstream 12453 true Chr1: 2334390-2346842 Arabidopsis thaliana
AT1G07620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2334390-2344389 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373681 5261 Brassicaceae View MSA
123800599 5264 Brassicales-Malvales View MSA
124297997 5266 SBM View MSA
124149747 5268 Malvidae View MSA
123875492 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.681       High
cufflinks 1.194        
cufflinks 1.582        
cufflinks 2.535        
cufflinks 3.601        
cufflinks 0.767       Low

0 Strain