Gene : AT1G07080 A. thaliana TAIR10
Defline:  (1 of 5) PTHR13234//PTHR13234:SF8 - GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT // GAMMA-INTERFERON-INDUCIBLE LYSOSOMAL THIOL REDUCTASE Genomic Order:  641
Name:  ? AT1G07080 Secondary Identifier:  ? PAC:19649102
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07080 0.5kb upstream 0.5kb upstream 2713 true Chr1: 2169482-2172194 Arabidopsis thaliana
AT1G07080 0.5kb upstream 0.5kb upstream 500 false Chr1: 2169482-2169981 Arabidopsis thaliana
AT1G07080 0.5kb downstream 0.5kb downstream 2713 true Chr1: 2169982-2172694 Arabidopsis thaliana
AT1G07080 0.5kb downstream 0.5kb downstream 500 false Chr1: 2172195-2172694 Arabidopsis thaliana
AT1G07080 1.0kb upstream 1.0kb upstream 3213 true Chr1: 2168982-2172194 Arabidopsis thaliana
AT1G07080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2168982-2169981 Arabidopsis thaliana
AT1G07080 1.0kb downstream 1.0kb downstream 3213 true Chr1: 2169982-2173194 Arabidopsis thaliana
AT1G07080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2172195-2173194 Arabidopsis thaliana
AT1G07080 2.0kb upstream 2.0kb upstream 4213 true Chr1: 2167982-2172194 Arabidopsis thaliana
AT1G07080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2167982-2169981 Arabidopsis thaliana
AT1G07080 2.0kb downstream 2.0kb downstream 4213 true Chr1: 2169982-2174194 Arabidopsis thaliana
AT1G07080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2172195-2174194 Arabidopsis thaliana
AT1G07080 5.0kb upstream 5.0kb upstream 7213 true Chr1: 2164982-2172194 Arabidopsis thaliana
AT1G07080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2164982-2169981 Arabidopsis thaliana
AT1G07080 5.0kb downstream 5.0kb downstream 7213 true Chr1: 2169982-2177194 Arabidopsis thaliana
AT1G07080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2172195-2177194 Arabidopsis thaliana
AT1G07080 10.0kb upstream 10.0kb upstream 12213 true Chr1: 2159982-2172194 Arabidopsis thaliana
AT1G07080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2159982-2169981 Arabidopsis thaliana
AT1G07080 10.0kb downstream 10.0kb downstream 12213 true Chr1: 2169982-2182194 Arabidopsis thaliana
AT1G07080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2172195-2182194 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378950 5261 Brassicaceae View MSA
123830064 5264 Brassicales-Malvales View MSA
124338067 5266 SBM View MSA
124248311 5268 Malvidae View MSA
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.483     High High
cufflinks 23.962        
cufflinks 29.164     High  
cufflinks 26.185        
cufflinks 35.741     High High
cufflinks 23.013       Low

0 Strain