Gene : AT1G06830 A. thaliana TAIR10
Defline:  (1 of 4) PTHR10168//PTHR10168:SF57 - GLUTAREDOXIN // GLUTAREDOXIN-C13-RELATED Genomic Order:  616
Name:  ? AT1G06830 Secondary Identifier:  ? PAC:19654095
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06830 0.5kb upstream 0.5kb upstream 1005 true Chr1: 2096651-2097655 Arabidopsis thaliana
AT1G06830 0.5kb upstream 0.5kb upstream 500 false Chr1: 2096651-2097150 Arabidopsis thaliana
AT1G06830 0.5kb downstream 0.5kb downstream 1005 true Chr1: 2097151-2098155 Arabidopsis thaliana
AT1G06830 0.5kb downstream 0.5kb downstream 500 false Chr1: 2097656-2098155 Arabidopsis thaliana
AT1G06830 1.0kb upstream 1.0kb upstream 1505 true Chr1: 2096151-2097655 Arabidopsis thaliana
AT1G06830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2096151-2097150 Arabidopsis thaliana
AT1G06830 1.0kb downstream 1.0kb downstream 1505 true Chr1: 2097151-2098655 Arabidopsis thaliana
AT1G06830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2097656-2098655 Arabidopsis thaliana
AT1G06830 2.0kb upstream 2.0kb upstream 2505 true Chr1: 2095151-2097655 Arabidopsis thaliana
AT1G06830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2095151-2097150 Arabidopsis thaliana
AT1G06830 2.0kb downstream 2.0kb downstream 2505 true Chr1: 2097151-2099655 Arabidopsis thaliana
AT1G06830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2097656-2099655 Arabidopsis thaliana
AT1G06830 5.0kb upstream 5.0kb upstream 5505 true Chr1: 2092151-2097655 Arabidopsis thaliana
AT1G06830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2092151-2097150 Arabidopsis thaliana
AT1G06830 5.0kb downstream 5.0kb downstream 5505 true Chr1: 2097151-2102655 Arabidopsis thaliana
AT1G06830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2097656-2102655 Arabidopsis thaliana
AT1G06830 10.0kb upstream 10.0kb upstream 10505 true Chr1: 2087151-2097655 Arabidopsis thaliana
AT1G06830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2087151-2097150 Arabidopsis thaliana
AT1G06830 10.0kb downstream 10.0kb downstream 10505 true Chr1: 2097151-2107655 Arabidopsis thaliana
AT1G06830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2097656-2107655 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122367538 5261 Brassicaceae View MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.28        
cufflinks 19.718       High
cufflinks 1.659       Low
cufflinks 5.702        
cufflinks 1.297       Low
cufflinks 15.932        

0 Strain