Gene : AT1G06790 A. thaliana TAIR10
Defline:  (1 of 1) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H) Genomic Order:  612
Name:  ? AT1G06790 Secondary Identifier:  ? PAC:19652883
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06790 0.5kb upstream 0.5kb upstream 3055 true Chr1: 2086732-2089786 Arabidopsis thaliana
AT1G06790 0.5kb upstream 0.5kb upstream 500 false Chr1: 2086732-2087231 Arabidopsis thaliana
AT1G06790 0.5kb downstream 0.5kb downstream 3055 true Chr1: 2087232-2090286 Arabidopsis thaliana
AT1G06790 0.5kb downstream 0.5kb downstream 500 false Chr1: 2089787-2090286 Arabidopsis thaliana
AT1G06790 1.0kb upstream 1.0kb upstream 3555 true Chr1: 2086232-2089786 Arabidopsis thaliana
AT1G06790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2086232-2087231 Arabidopsis thaliana
AT1G06790 1.0kb downstream 1.0kb downstream 3555 true Chr1: 2087232-2090786 Arabidopsis thaliana
AT1G06790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2089787-2090786 Arabidopsis thaliana
AT1G06790 2.0kb upstream 2.0kb upstream 4555 true Chr1: 2085232-2089786 Arabidopsis thaliana
AT1G06790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2085232-2087231 Arabidopsis thaliana
AT1G06790 2.0kb downstream 2.0kb downstream 4555 true Chr1: 2087232-2091786 Arabidopsis thaliana
AT1G06790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2089787-2091786 Arabidopsis thaliana
AT1G06790 5.0kb upstream 5.0kb upstream 7555 true Chr1: 2082232-2089786 Arabidopsis thaliana
AT1G06790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2082232-2087231 Arabidopsis thaliana
AT1G06790 5.0kb downstream 5.0kb downstream 7555 true Chr1: 2087232-2094786 Arabidopsis thaliana
AT1G06790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2089787-2094786 Arabidopsis thaliana
AT1G06790 10.0kb upstream 10.0kb upstream 12555 true Chr1: 2077232-2089786 Arabidopsis thaliana
AT1G06790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2077232-2087231 Arabidopsis thaliana
AT1G06790 10.0kb downstream 10.0kb downstream 12555 true Chr1: 2087232-2099786 Arabidopsis thaliana
AT1G06790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2089787-2099786 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
122369852 5261 Brassicaceae View MSA
123833295 5264 Brassicales-Malvales View MSA
124341767 5266 SBM View MSA
124240329 5268 Malvidae View MSA
124064217 5270 Rosid View MSA
123737129 5271 Pentapetalae View MSA
122791861 5272 Eudicot View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.318        
cufflinks 3.286        
cufflinks 1.774        
cufflinks 3.166        
cufflinks 1.572       Low
cufflinks 3.122        

0 Strain